section 1 · User commands 💻

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S (continued)

seqdiag3(1)generate sequence-diagram image file from spec-text file.✨
seqdiff(1)<short_description>✨
SeqDist(1)remove noise from high throughput nucleotide sequence data✨
seqfraggle(1e)Removes fragment sequences from DHF files.✨
seqgo(1e)Extract a list of GO terms from a sequence entry✨
seqinfo(1e)Returns sequence information✨
seqkit(1)cross-platform and ultrafast toolkit for FASTA/Q file manipulation✨
seqkit-benchmark(1)cross-platform and ultrafast toolkit for FASTA/Q file manipulation✨
seqmagick(1)Manipulate sequence files✨
seqmatchall(1e)All-against-all word comparison of a sequence set✨
SeqNoise(1)remove noise from high throughput nucleotide sequence data✨
seqnr(1e)Removes redundancy from DHF files.✨
seqprep(1)merge paired end Illumina reads SeqPrep is a program to merge paired end Illumina reads that are overlapping into a single longer read. It may also just be used for its adapter trimming feature…✨
seqret(1e)Reads and writes (returns) sequences✨
seqretall(1e)Reads and writes (returns) a set of sequences one at a time✨
seqretallfeat(1e)Reads and writes (returns) one or more sequences✨
seqretset(1e)Reads and writes (returns) a set of sequences all at once✨
seqretsetall(1e)Reads and writes (returns) many sets of sequences✨
seqretsingle(1e)Reads and writes (returns) a single sequence✨
seqretsplit(1e)Reads sequences and writes them to individual files✨
seqrettype(1e)Reads and writes (returns) sequences✨
seqsearch(1e)Generate PSI-BLAST hits (DHF file) from a DAF file.✨
seqsero(1)Salmonella serotyping from genome sequencing data✨
seqsero_batch_pair-end(1)batch processing of paired-end reads using seqsero✨
seqsort(1e)Remove ambiguous classified sequences from DHF files.✨
seqsplit(1)split seqs into chunks of defined size and overlap✨
seqstat(1)show statistics and format for a sequence file✨
seqtax(1e)Extract a list of taxonomy ids from a sequence entry✨
seqtk(1)sampling, trimming, fastq2fasta, subsequence, reverse complement✨
sequel(1)The Database Toolkit for Ruby✨
SequenceCoverageCalculator(1)library for LC/MS data management and analysis - tools✨
sequenceDiversity(1)✨
sequencer(1)Sardana GUI application for executing macro sequences✨
sequencer66(1)Real-time live MIDI sequencer refactored from Seq24, Native JACK✨
sequin(1)submit sequences to Genbank, EMBL, and DDBJ✨
seqwords(1e)Generates DHF files from keyword search of UniProt.✨
seqxref(1e)Retrieve all database cross-references for a sequence entry✨
seqxrefall(1e)Retrieve all cross-references for a sequence record✨
seqxrefget(1e)Retrieve all cross-referenced data for a sequence entry✨
ser-player(1)A video player and processing utility for SER files.✨
sercomp(1)manual page for sercomp✨
serdi(1)read and write RDF syntax✨
seren(1)A simple VoIP program to create conferences from the terminal✨
serialver(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-1.8.0-openjdk-1.8.0.504.b01-2.1.el9.x86_64(1)Returns the serial version UID for specified classes.✨
serialver-java-1.8.0-openjdk-1.8.0.504.b01-2.1.el9.x86_64-fastdebug(1)Returns the serial version UID for specified classes.✨
serialver-java-1.8.0-openjdk-1.8.0.504.b01-2.1.el9.x86_64-slowdebug(1)Returns the serial version UID for specified classes.✨
serialver-java-11-openjdk-11.0.20.1.1-2.el9.x86_64(1)Returns the serial version UID for specified classes.✨
serialver-java-11-openjdk-11.0.20.1.1-2.el9.x86_64-fastdebug(1)Returns the serial version UID for specified classes.✨
serialver-java-11-openjdk-11.0.20.1.1-2.el9.x86_64-slowdebug(1)Returns the serial version UID for specified classes.✨
serialver-java-17-openj9(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-17-openjdk(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-17-openjdk-17.0.20.1.1-1.2.el9.x86_64(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-17-openjdk-17.0.20.1.1-1.2.el9.x86_64-fastdebug(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-17-openjdk-17.0.20.1.1-1.2.el9.x86_64-slowdebug(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-21-openj9(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-21-openjdk(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-21-openjdk-21.0.12.1.1-2.1.el9.x86_64(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-21-openjdk-21.0.12.1.1-2.1.el9.x86_64-fastdebug(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-21-openjdk-21.0.12.1.1-2.1.el9.x86_64-slowdebug(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-21-openjdk-fastdebug(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-21-openjdk-slowdebug(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-22-openjdk(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-java-23-openjdk(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-openjdk11(1)Returns the serial version UID for specified classes.✨
serialver-openjdk17(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-openjdk21(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-openjdk25(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-openjdk27(1)return the serialVersionUID for one or more classes in a form suitable for copying into an evolving class✨
serialver-openjdk8(1)Returns the serial version UID for specified classes.✨
serialview(1)Terminal emulator for uCsim✨
sername(1)manual page for sername✨
sertok(1)manual page for sertok✨
sertop(1)manual page for sertop✨
servefile(1)small HTTP-Server for temporary file transfer✨
serverspec-runner(1)simple execution framework for serverspec✨
servertell(1e)Display information about a public server✨
servertool(1)Provides an easy-to-use interface for developers to register, unregister, start up, and shut down a persistent server.✨
servertool-java-1.8.0-openjdk-1.8.0.504.b01-2.1.el9.x86_64(1)Provides an easy-to-use interface for developers to register, unregister, start up, and shut down a persistent server.✨
servertool-java-1.8.0-openjdk-1.8.0.504.b01-2.1.el9.x86_64-fastdebug(1)Provides an easy-to-use interface for developers to register, unregister, start up, and shut down a persistent server.✨
servertool-java-1.8.0-openjdk-1.8.0.504.b01-2.1.el9.x86_64-slowdebug(1)Provides an easy-to-use interface for developers to register, unregister, start up, and shut down a persistent server.✨
servertool-openjdk8(1)Provides an easy-to-use interface for developers to register, unregister, start up, and shut down a persistent server.✨
services-admin(1)Services Administration Tool✨
ses_report(1)SCSI Enclosure Services (SES) status and metrics reporting utility✨
sesearch(1)SELinux policy query tool✨
sess_id(13ssl)OpenSSL application commands✨
sess_id(1ossl)OpenSSL application commands✨
sess_id(1ssl)OpenSSL application commands✨
session-migration(1)Migrate in user session settings.✨
session-token(1p)command-line script for generating session tokens✨
sessionmirror.py(1)download experiment from XNAT instances✨
sessionStats(1)✨
sessreg(1)manage utmpx/wtmpx entries for non-init clients✨
set(1)display and change shell variables✨
set(1p)set or unset options and positional parameters✨
set(1posix)set or unset options and positional parameters✨
set_color(1)set the terminal color✨
set_show_service(1)enable or disable a service for the current user✨
set_tag.plug(1rrp)a plugin for rpmrebuild, to replace a tag value in spec file✨
set_unicharset_properties(1)set properties about the unichars✨
setAlphaField(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
setBfree(1)DSP tonewheel organ✨
setBfreeUI(1)DSP tonewheel organ Graphical User Interface✨
setblock(1)✨
setbrlkeys(1)setup a braille keymap✨
setcd(1)set various flags to control the behaviour of your cdrom device.✨
setcifsacl(1)Userspace helper to alter components of a security descriptor for Common Internet File System (CIFS)✨
setcollection(1)change the desktop wallpaper✨
setconf(1)change settings in configuration textfiles✨
setenv(1)index of FreeBSD shell built-in commands✨
setExprBoundaryFields(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
setExprFields(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
setfacl(1)set file access control lists✨
setfattr(1)set extended attributes of filesystem objects✨
setfdprm(1)sets user-provided floppy disk parameters✨
setfib(1)execute a utility with an altered default network view✨
setFields(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
setfondname(1)sets FOND name✨
setforward(1)create a forwarding database✨
setfx(1)load user defined chorus / reverb mode effects✨
sethead(1)Set FITS or IRAF header keyword values✨
sethost(1)Emulates a DEC VT100 terminal✨
seticons(1)sets the icon images used in Window Maker✨
setleds(1)set the keyboard leds✨
setmaillist(1)create a binary mailing list✨
setmattr(1)set file mirroring properties volumes✨
setmetamode(1)define the keyboard meta key handling✨
setop(1)make set of strings from input✨
setpdfbackground(1p)Apply a background color to a PDF page✨
setpdfbackground.pl(1)Apply a background color to a PDF page✨
setpdfmetadata(1)PDF Metadata Updater✨
setpdfpage(1p)Replace a page of PDF layout✨
setpdfpage.pl(1)Replace a page of PDF layout✨
setpgid(1)run a program in a new process group✨
setpib(1)Qualcomm Atheros PIB File Editor✨
setpix(1)Set FITS or IRAF image values✨
setpriv(1)run a program with different Linux privilege settings✨
setrandom(1)choose a random wallpaper and set it✨
setreg(1)Change settings for public key cryptography✨
setregdomain(1)set regulatory domain based on country code✨
setroot(1)sets your wallpaper.✨
setSet(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
setsid(1)run a program in a new session✨
setstate(1)✨
setsToZones(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
setstyle(1)set style related options for Window Maker or loads a theme✨
settc(1)index of FreeBSD shell built-in commands✨
setterm(1)set terminal attributes✨
settime(1)(XENIX) change the access and modification dates of files✨
settimed(1)start an event loop for a timed wallpaper✨
settle(1)CLI tool to manage a digital Zettelkasten✨
settle-ls(1)list things not related to notes✨
settle-query(1)query the database✨
settle-sync(1)sync the database✨
setTurbulenceFields(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
setty(1)index of FreeBSD shell built-in commands✨
setuid(1)run a command with a different uid.✨
setup(1)graphical setup program for the esp package manager✨
setup-box(1)setup a variety of Alpine Linux Environments✨
setup-nsssysinit(1)Query or enable the nss-sysinit module✨
setup-packaging-environment(1)helps one to get started with Ubuntu development✨
setup-plt(1)compatibility Racket setup tool✨
setup-theme-d-bootstrap-env(1)install the Theme-D bootstrap environment✨
setup-theme-d-test-env(1)install the Theme-D testing environment✨
setup_beancounter(1p)Create and initialise BeanCounter databases✨
setup_designer(1)A script to configure the system for use of QTdesigner✨
setupcon(1)sets up the font and the keyboard on the console✨
setuptools-git-versioning(1)Use git repo data for building a version number according to PEP-440✨
setvar(1)index of FreeBSD shell built-in commands✨
setvirtualenvproject(1)a set of wrappers to assist with manage your python virtualenvs All of the commands below are to be used on the Terminal command line.✨
setvtrgb(1)customize the console color map✨
setwallpaper(1)set the desktop wallpaper✨
setxkbmap(1)set keymaps and layouts via the X Keyboard Extension✨
setzer(1)simple yet full-featured LaTeX editor✨
sevisual_query(1)SELinux policy visual query✨
sevmgr(1)Command-line interpreter for the C++ Simulation-Oriented Discrete Event Management Library✨
sevmgr-config(1)Configuration Script for the C++ Simulation-Oriented Discrete Event Management Library✨
sevmgr_demo(1)Command-line demonstration utility for the C++ Simulation- Oriented Discrete Event Management Library✨
sex(1)extract a source catalogue from an astronomical FITS image✨
sexget(1)receive stream from a Stream EXchange (SEX) server✨
sexp-conv(1)convert s-expression to a different encoding✨
sexpect(1)Expect for Shells✨
sexpp(1)Read, parse, and print out S-expressions✨
sexsend(1)send strem via a Stream EXchange (SEX) server✨
sexxx(1)send strem via a Stream EXchange (SEX) server✨
seyon(1)X11 Telecommunications Package.✨
seyon-emu(1)X11 Telecommunications Package.✨
sf2cfg(1)construct gt cfg files for SoundFonts✨
sf2dump(1)Parses SoundFont v2 (.sf2) files and prints out the content.✨
sf2extract(1)Extract samples from SoundFont version 2 (.sf2) files.✨
sf2text(1)program to convert between SBK or SF2 (SoundFont) and text format✨
sf3convert(1)SoundFont conversion utility✨
sfarkxtc(1)Converts soundfonts in the legacy sfArk v2 file format to sf2✨
sfcapd(1)sflow collector for sflow version v2/v4 and v5✨
sfcbd(1)Small-Footprint CIM Broker (sfcb)✨
sfcbdump(1)sfcBroker repository dumper✨
sfcbinst2mof(1)Dump static instances to mof✨
sfcbmof(1)MOF compile for the Small-Footprint CIM Broker (sfcb)✨
sfcbrepos(1)Script to rebuild the Small-Footprint CIM Broker (sfcb) class repository✨
sfcbstage(1)Script to copy provider MOF and registration files to the Small-Footprint CIM Broker (sfcb) staging area✨