SEQSERO_BATCH_PAIR-END(1)
π SEQSERO_BATCH_PAIR-END π
okay so bestie, welcome to seqsero_batch_pair-end, a lil user command living in section 1 of the manual (iykyk β¨). it's the batch-girlie version of seqsero and honestly? she's lowkey iconic for it.
πΈ NAME πΈ
seqsero_batch_pair-end β batch processing of paired-end reads using seqsero π§¬
π SYNOPSIS π
seqsero_batch_pair-end <dir_with_sequence_pairs>
β¨ DESCRIPTION β¨
so here's the vibe: this script goes rummaging through a directory looking for paired-end reads, and then runs every single pair through seqsero using the -m2 option. that's the whole job. she's thorough, she's efficient, she's giving β¨dedicated batch processorβ¨.
and the best part? if a sequence pair was already processed before, she just... skips it. no redoing the work, no wasted time. the way that she remembers?? obsessed. π
not me gatekeeping this but fr fr β she does not re-run your old pairs. if it's done, it's done. periodt.
π AUTHOR π
this manpage was written by Andreas Tille for the Debian distribution, and it can be used for any other usage of the program. slay, Andreas. π«Ά
and that's the whole page bestie, we ate and left no crumbs π
this was seqsero_batch_pair-end version 1.0, dated April 2017 β mwah, take care of her, she's a classic ππ¦
π¦ where this page comes from
- debian bookworm: seqsero 1.0.1+dfsg-6 Β· GPL-2.0-or-later
- debian trixie: seqsero 1.0.1+dfsg-6 Β· GPL-2.0-or-later
- ubuntu jammy: seqsero 1.0.1+dfsg-5 Β· GPL-2.0-or-later
- ubuntu noble: seqsero 1.0.1+dfsg-6 Β· GPL-2.0-or-later
- ubuntu questing: seqsero 1.0.1+dfsg-6
- ubuntu resolute: seqsero 1.0.1+dfsg-6build1 Β· GPL-2.0-or-later
- ubuntu stonking: seqsero 1.0.1+dfsg-6build1 Β· GPL-2.0-or-later
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms