📦 codonw

C

• codonw(1)Correspondence Analysis of Codon Usage✨
• codonw-aau(1)calculate Amino Acid Usage (AAU)✨
• codonw-base3s(1)silent base G+C+A+T calculating program✨
• codonw-bases(1)detailed report of base composition✨
• codonw-cai(1)calculate Codon Adaptation Index (CAI)✨
• codonw-cbi(1)calculate Codon Bias Index (CBI)✨
• codonw-cu(1)calculate codon usage✨
• codonw-cutab(1)tabulation of codon usage✨
• codonw-cutot(1)tabulation of datasets codon usage✨
• codonw-dinuc(1)dinucleotide usage of the three codon positions✨
• codonw-enc(1)calculate Effective Number of Codons (ENc)✨
• codonw-fop(1)calculate Frequency of OPtimal codons index (FOP)✨
• codonw-gc(1)G+C content of gene (all 3 codon positions)✨
• codonw-gc3s(1)GC of synonymous codons 3rd positions✨
• codonw-raau(1)calculate Relative Amino Acid Usage (RAAU)✨
• codonw-reader(1)output sequence in reader format✨
• codonw-rscu(1)calculate Relative Synonymous Codon Usage (RSCU)✨
• codonw-tidy(1)clean up sequence in FASTA format✨
• codonw-transl(1)conceptual translation of DNA to amino acid✨