CODONW-GC3S(1)

✨ NAME ✨

okay bestie, so like — codonw-gc3s 💖 it's all about the GC of synonymous codons 3rd positions 🧬✨ (yes that's the whole name, she's a mouthful, we love her anyway).

It's a codonw-gc3s(1) situation, live from the User Commands section, and she is literally your shortcut queen 👑

🌸 SYNOPSIS 🌸

codonw-gc3s inputfile outputfile bulkoutputfile <options>

💅 DESCRIPTION 💅

So here's the tea 🍓: codonw-gc3s is just a shortcut to getting into the codonw(1) executable — except the 'GC of synonymous codons 3rd positions' option is already preselected for you (-gc3s), like a lil preset filter that says "yeah I already chose this, don't worry about it" 🙈

Which means it's doing this whole thing:

codonw -gc3s ...

And the way the command line arguments work? They follow the order of arguments in codonw itself — same lineup, same energy, no surprises 🫶 Don't try to reinvent the order, she's not gonna vibe with that.

ngl the order of args matters here — inputfile, then outputfile, then bulkoutputfile, then your <options>, exactly like codonw does it. iykyk 💜

🌈 SEE ALSO 🌈

• codonw(1) — the main character, go read her page too 👑

and that's the whole page babes, she's short but she ate 💅✨

this one's brought to you by the CODONW crew, from November 2015 — vintage but still serving, fr fr 🎀