CODONW-TIDY(1)
π NAME π
codonw-tidy β bestie, this one cleans up your sequence when it's sitting there in FASTA format β¨
πΈ SYNOPSIS πΈ
codonw-tidy inputfile outputfile bulkoutputfile <options>
π DESCRIPTION π
okay so real talk: codonw-tidy is literally just a shortcut, a lil β¨glow-upβ¨ on the way you'd normally reach the codonw(1) executable. it's the same thing, except it already has the clean up sequence in FASTA format option β that's -tidy β preselected for you π
so like, instead of typing the whole thing out yourself:
codonw -tidy ...
...you just run codonw-tidy and it's giving same energy, less typing π¦
and the way the command line arguments work? they follow the order of arguments in codonw itself, no cap π«Ά so if you already know how codonw does it, you already know how this does it. iconic.
π SEE ALSO π
codonw(1)β the main character, go read that one too π
mwah π that's the whole page, you ate that fr fr β this one came from CODONW, dated November 2015, and yes bestie the manual name up top is CODONW-TIDY(1) in case you needed the receipts π§β
π¦ where this page comes from
- debian bookworm: codonw 1.4.4-7 Β· GPL-2.0-only
- debian trixie: codonw 1.4.4-8 Β· GPL-2.0-only
- ubuntu jammy: codonw 1.4.4-6 Β· GPL-2.0-only
- ubuntu noble: codonw 1.4.4-8 Β· GPL-2.0-only
- ubuntu resolute: codonw 1.4.4-8build1 Β· GPL-2.0-only
- ubuntu stonking: codonw 1.4.4-8build1 Β· GPL-2.0-only
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms