CODONW-ENC(1)

💖 CODONW-ENC 💖

okay bestie, welcome to the codonw-enc manual page — that's section 1 of the CODONW manual, for all my girlies who need to know exactly how non-randomly a genome is using its codons. yes we're doing bioinformatics at 2am. yes it's iconic. ✨

🌸 NAME 🌸

codonw-enc — calculate Effective Number of Codons (ENc)

like literally the whole job. one number. how much codon bias does your sequence have. no cap. 💅

✨ SYNOPSIS ✨

codonw-enc inputfile outputfile bulkoutputfile <options>

so you hand it an inputfile, you tell it where you want the outputfile, you give it a bulkoutputfile (yes, both, it's that kind of program, she contains multitudes 💀), and then any <options> you wanna sprinkle on top.

🦋 DESCRIPTION 🦋

okay so here's the tea: codonw-enc is a shortcut to accessing the codonw(1) executable, with the 'calculate Effective Number of Codons (ENc)' option -enc already preselected. she did the pre-work for you. main character energy fr fr. 👑

which is just a long way of saying this:

codonw -enc ...

same thing. same program. one flag fewer to type. iykyk. 🎀

and listen — the command line arguments follow the order of arguments in codonw itself. so don't get creative with the ordering, bestie, just match what codonw expects and you'll be fine. 🫶

🌈 SEE ALSO 🌈

• codonw(1) — the actual full program, the mothership, the source of all truth. go read her too. 💖

ngl the shortest manpage i've ever seen and honestly? she said what she said. no filler. respect. 💅

CODONW · November 2015 — that's the source, the version and the date, and that's the whole page babes, mwah, go calculate some ENc 🦋🌸💜