📦 genomethreader

12 pages

A

align_dna(1)spliced align genomic sequence with cDNA✨

G

gth(1)predict genome structures✨
gthbssmbuild(1)build splice site model✨
gthbssmfileinfo(1)show info about splice site model✨
gthbssmprint(1)print splice site model✨
gthbssmrmsd(1)calculate distance between splice site models✨
gthbssmtrain(1)train splice site model✨
gthconsensus(1)build consensus spliced alignments✨
gthfilestat(1)show statistics about consensus spliced alignments✨
gthgetseq(1)get FASTA sequences from GenomeThreader files✨
gthmkbssmfiles(1)rite hard coded BSSM files✨
gthsplit(1)split GenomeThreader output files✨