section 1 · User commands 💻
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all1 (63866)1* (1)1-py (4)10 (1)13ssl (112)1B (20)1L (11)1NCAR (2)1NCARG (33)1Nhl (1)1PVM (5)1WN (4)1X (1)1alc (44)1ast (6)1b (9)1coin2 (1)1coin3 (1)1e (337)1fun (19)1grass (731)1gv (17)1gx (1)1m (18)1mh (57)1moreutils (1)1nas (21)1ossl (112)1p (1484)1perl (258)1pg13 (35)1pg14 (35)1pg15 (35)1pg16 (34)1pg17 (37)1pg18 (37)1plan9 (45)1posix (175)1ppt (122)1qmail (1)1rheolef (17)1rrp (12)1so (11)1sr (108)1ssl (114)1t (1)1texmf-dist (358)1viewos (1)1x (146)
C (continued)
- chewmail(1)mail archiver✨
- chez(1)Chez Scheme petite - Petite Chez Scheme✨
- chezdav(1)simple WebDAV server✨
- chezscheme(1)Chez Scheme petite - Petite Chez Scheme✨
- chflags(1)change file flags✨
- chfn(1)change your finger information✨
- chg(1)a fast client for Mercurial command server✨
- chgrp(1)change group ownership✨
- chgrp(1p)change the file group ownership✨
- chgrp(1posix)change the file group ownership✨
- chgrp(1ppt)change group ownership of files✨
- chiaki(1)PlayStation remote play client✨
- chibi-doc(1)generate documentation from Scheme scribble syntax✨
- chibi-ffi(1)generate C from Scheme stub files✨
- chibi-scheme(1)a tiny Scheme interpreter✨
- chicken(1)A Scheme-to-C translator✨
- chicken-csc(1)driver program for the CHICKEN Scheme compiler✨
- chicken-csi(1)The CHICKEN Scheme interpreter✨
- chicken-do(1)run a shell command unless the target exists and any dependency is not newer than the target✨
- chicken-install(1)download and install extension libraries for CHICKEN Scheme✨
- chicken-profile(1)generate a report from profile-information✨
- chicken-status(1)list information about installed libraries✨
- chicken-uninstall(1)uninstall extension library✨
- childCheckpwdwithPAM(1)launch ukui-control-center program✨
- chilight(1)highlight a C source file✨
- chilli_opt(1)Configuration utility for CoovaChilli✨
- chilli_proxy(1)Chilli HTTP API Proxy✨
- chilli_query(1)Interface into the chilli server✨
- chilli_radconfig(1)Utility function to fetch configurations over RADIUS✨
- chilli_radsec(1)Chilli RadSec Tunnel Server✨
- chilli_redir(1)Chilli Redirection/Portal Server✨
- chilli_response(1)Forms a CHAP Response✨
- chilli_rtmon(1)Default Route Monitor for CoovaChilli✨
- chilli_script(1)CoovaChilli Script Utility✨
- chimeraslayer(1)detects likely chimeras in PCR amplified DNA✨
- ching(1ppt)the Book of Changes✨
- chio(1)medium changer control utility✨
- ChiPass(1)✨
- ChiPass-cli(1)✨
- chipcard-tool(1)a commandline client to access smart cards via libchipcard✨
- chipcenter(1)Feature Centering Tool for ChIP-seq data analysis✨
- chipcor(1)Feature Correlation Tool for ChIP-seq data analysis✨
- chipextract(1)Feature Correlation and Extraction Tool for ChIP-seq data analysis✨
- chippart(1)Partitioning Tool for ChIP-seq data analysis✨
- chippeak(1)Locates signal peaks within a set of tags positions produced by a ChIP-Seq experiment✨
- chips(1e)Calculates Nc codon usage statistic✨
- chipscore(1)Feature Extraction Tool for ChIP-seq data analysis✨
- chirp(1)command line tool providing explicit control of a Chirp server.✨
- chirp_audit_cluster(1)share resources in a heterogeneous, and unreliable computing environment✨
- chirp_benchmark(1)do micro-performance tests on a Chirp server✨
- chirp_distribute(1)copy a directory from one Chirp server to one or more Chirp server(s).✨
- chirp_fuse(1)create a FUSE mount point with virtual access to remote chirp servers✨
- chirp_get(1)get a single file from a Chirp server to local machine✨
- chirp_md5sum(1)share resources in a heterogeneous, and unreliable computing environment✨
- chirp_put(1)copy a single file from local machine to a Chirp server✨
- chirp_server(1)create a Chirp user-level filesystem✨
- chirp_server_hdfs(1)run a chirp server with HDFS client setup✨
- chirp_status(1)get current status of a one or more Chirp server(s)✨
- chirp_stream_files(1)move data to/from chirp servers in parallel✨
- chirpw(1)A tool for programming two-way radio equipment✨
- chkconc(1)list concatenation for hinshi✨
- chkdvifont(1)CHecK DVI/tfm/font file and report information of FONTs✨
- chkdvifont(1texmf-dist)CHecK DVI/tfm/font file and report information of FONTs✨
- chkey(1)change your encryption key✨
- chkhelp(1)check performance metrics help text files✨
- chklref(1)manual page for chklref 3.1.2✨
- chklref(1texmf-dist)manual page for chklref 3.1.2✨
- chkmpqcval(1)run the mpqc validation suite chkmpqcval - check the .out files for correctness✨
- chknvm(1)Qualcomm Atheros PLC Image File Validator✨
- chknvm2(1)Qualcomm Atheros PLC Image File Validator✨
- chkpib(1)Qualcomm Atheros PLC Parameter File Inspector✨
- chkpib2(1)Qualcomm Atheros PLC Parameter File Inspector✨
- chktex(1)finds typographic errors in LaTeX.✨
- chktex(1texmf-dist)finds typographic errors in LaTeX.✨
- chktri(1)check for trigraphs in C source code✨
- chktrust(1)Check the trust of a PE binary.✨
- chkweb(1)runs the LaTeX parts of a CWEB file through chktex✨
- chkweb(1texmf-dist)runs the LaTeX parts of a CWEB file through chktex✨
- chm_http(1)Simplistic web server to allow browsing of chm files without extracting them.✨
- chmcmd(1)The FPC Pascal htmlhelp (CHM) compiler✨
- chmcmd-3.2.2(1)The FPC Pascal htmlhelp (CHM) compiler✨
- chmls(1)The FPC Pascal CHM utility✨
- chmls-3.2.2(1)The FPC Pascal CHM utility✨
- chmod(1)change file mode bits✨
- chmod(1p)change the file modes✨
- chmod(1posix)change the file modes✨
- chmod(1ppt)change permissions of files✨
- chmoddic(1)change access rights for a directory✨
- choom(1)display or adjust OOM-killer score✨
- choose(1)human-friendly and fast alternative to cut and awk✨
- chooseLines(1)Randomly choose k lines from a file of n lines, for 0 < k < n.✨
- choosewm(1)Select a window manager to be used.✨
- choqok(1)Blogging client for KDE4✨
- chordii(1)A text file to music sheet converter✨
- chordpro(1)A lyrics and chords formatting program✨
- chordpro(1p)A lyrics and chords formatting program✨
- chown(1)change file owner and group✨
- chown(1b)(BSD) change file ownwer✨
- chown(1p)change the file ownership✨
- chown(1posix)change the file ownership✨
- chown(1ppt)change ownership of files✨
- chpass(1)add or change user database information✨
- chprop(1)change file properties on the Rio Karma✨
- chr(1)chr is a terminal based editor✨
- chroma(1)general purpose syntax highlighting program✨
- chroma-v2(1)general purpose syntax highlighting program✨
- ChromHMM(1)Learning and analysis chromatin states using a multivariate Hidden Markov Model✨
- ChromImpute(1)Large-scale systematic epigenome imputation✨
- chromium(1)the web browser from Google✨
- chromium-browser(1)the web browser from Google✨
- chromostitch.pl(1)Makes stitch files for feeding to geneparse.pl to allow feeding of multiple chromosomes to programs like murasaki✨
- chronic(1)runs a command quietly unless it fails✨
- chronicle(1)A simple blog compiler.✨
- chronicle-entry-filter(1)Convert blog files to HTML, if required.✨
- chronicle-ping(1)Send outgoing PING requests for new pages.✨
- chronicle-rss-importer(1)Import entries from an RSS feed to chronicle✨
- chronicle-spooler(1)Automatically post pre-written entries.✨
- chronyc(1)command-line interface for chrony daemon✨
- chroot(1)run command or interactive shell with special root directory✨
- chroot_package_run(1)repeat a program within the package with the help of chroot✨
- chrootuid(1)run command in restricted environment✨
- chrpath(1)change the rpath or runpath in binaries✨
- chrt(1)manipulate the real-time attributes of a process✨
- chsh(1)change your login shell✨
- chsh.ldap(1)change login shell in LDAP✨
- chsrc(1)Change Source for every software on every platform from the command line✨
- cht(1)chemtool drawings analyzer✨
- cht.sh(1)The only cheat sheet you need (command line client for cheat.sh)✨
- chtMultiRegionFoam(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
- chtMultiRegionSimpleFoam(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
- chtMultiRegionTwoPhaseEulerFoam(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
- chuck(1)audio programming language for real-time synthesis, composition, and performance✨
- chuck.alsa(1)audio programming language for real-time synthesis, composition, and performance✨
- chuck.oss(1)audio programming language for real-time synthesis, composition, and performance✨
- chuck.pulse(1)audio programming language for real-time synthesis, composition, and performance✨
- chunkfs(1)mount arbitrary files via FUSE as a tree of chunk files✨
- chunksync(1)space-efficient incremental (remote) backups of large files✨
- chvt(1)change foreground virtual terminal✨
- chwb(1)change window borders✨
- chwb2(1)change window double-borders✨
- chwn(1)set WM_NAME atom of a window✨
- chwso(1)change window stacking order✨
- ci(1)check in RCS revisions✨
- cia(1sr)surfraw(1) search tools✨
- cidalias(1)view alias definitions in the NCID alias, blacklist and whitelist files✨
- cidcall(1)view calls, hangups, messages and end of calls in the NCID call file✨
- cideasy2ncid(1)CIDEasy Caller ID device to NCID server gateway✨
- cidupdate(1)update aliases in the NCID call file✨
- cif-diff(1)A tool to compare two mmCIF files✨
- cif-drop(1)A tool to drop columns from mmCIF files✨
- cif-grep(1)A tool like grep to print fields in mmCIF files that match patterns✨
- cif-merge(1)Merge the content of a modified PDB file into a mmCIF file✨
- cif-to-utf8(1)convert CIF escape sequences into Unicode characters.✨
- cif-validate(1)Validate the content of a mmCIF file✨
- cif2cbf(1)convert a CIF to a CBF file✨
- cif2cell(1)prepare CIF files for electronic structure calculations✨
- cif2cod(1)parse a CIF file, prepare a COD database table entry from it.✨
- cif2csv(1)convert a CIF file into a CSV file.✨
- cif2hkl(1)cif2hkl✨
- cif2json(1)parse CIF file and print out the structure generated by CIF parser.✨
- cif2pdb(1)Convert the contents of a mmCIF file into PDB format✨
- cif2qg(1)parse CIF file and print out the quotient graph.✨
- cif2rdf(1)parse a CIF file and describe its properties in RDF format.✨
- cif2ref(1)parse a CIF file and print out the essential information in the COD REF format. Accepts optional bibliography file in ref, xrf or plaintext format as the second command line argument.✨
- cif2tsv(1)get specified data values from a CIF file(s).✨
- cif2xyz(1)read CIF files and print atom coordinates in XYZ format. The default output format is as described in https://en.wikipedia.org/wiki/XYZ_file_format.✨
- cif_adjust_journal_name_volume(1)parse a CIF file, update the journal name and journal volume based on heuristics and output the updated file to STDOUT. The following heuristic is applied: if journal volume starts with a letter, add…✨
- cif_automorphism(1)find automorphism orbits in CIF files.✨
- cif_bounding_box(1)transform non-crystal CIF file (missing cell parameters and symmetry information, Cartesian coordinates are given instead of fractional) into a crystal description.✨
- cif_cell_contents(1)calculate cell contents from atom coordinates and symmetry information.✨
- cif_classify(1)classify a CIF structure -- find out if it is organic compound, inorganic, mineral, etc.✨
- cif_cod_check(1)parse a CIF file, check if certain data values match COD requirements and IUCr data validation criteria (Version: 2000.06.09, https://www.iucr.org/__data/iucr/ftp/pub/dvntests or…✨
- cif_cod_deposit(1)deposit CIFs into COD database using CGI deposition interface.✨
- cif_cod_numbers(1)find COD numbers for the CIF files in given directories of file lists.✨
- cif_CODify(1)extract essential data from the input CIF file and format it using the rules of the Crystallography Open Database (COD).✨
- cif_compare_dics(1)checks a pair of DDL1/DDLm dictionaries for compatibility breaking differences. Discrepancies between corresponding enumeration sets, default values, permitted ranges as well as data items unique to…✨
- cif_correct_tags(1)correct misspelt tags in a CIF file and output made changes into the standard I/O streams. By default, only tags from CIF Core and CIF COD dictionaries with extra '^_+' prefixes are corrected…✨
- cif_create_AMCSD_pressure_temp_tags(1)parse a CIF file, determine pressure and temperature tag values from the values of other tags. Designed for CIFs from AMCSD.✨
- cif_ddl1_dic_check(1)check DDL1 dictionaries against a set of best practice rules.✨
- cif_ddlm_dic_check(1)check DDLm dictionaries against a set of best practice rules.✨
- cif_ddlm_dic_print(1)pretty-print a DDLm dictionary file.✨
- cif_dictionary_tags(1)generate a list of all tags in a CIF dictionary.✨
- cif_diff(1)parse two CIF files and compare their content✨
- cif_distances(1)calculate minimal distance between atoms read from a CIF file.✨
- cif_estimate_Z(1)calculate Z value (i.e. the number of "chemical formula units" in the unit cell) using the provided cell volume, crystal density and molecular weight.✨
- cif_eval_numbers(1)read a CIF file and convert those number values that are written as simple fractions (e.g. "1/4") into a single floating point number.✨
- cif_Fcalc(1)compute the structure factors from CIF files.✨
- cif_fillcell(1)generate symmetric atoms from a CIF file.✨
- cif_filter(1)parse a CIF file and print out essential data values in the CIF format, the COD CIF style. This script has also many capabilities -- it can restore space group symbols from symmetry operators…✨
- cif_find_duplicates(1)find COD numbers for the .cif files in given directories of file lists.✨
- cif_find_symmetry(1)find the symmetry of the atoms in the unit cell of a CIF crystal structure. In order to obtain correct results most of the time, all atoms of the unit cell should be present in the input. This can be…✨
- cif_fix_AMCSD_aniso_labels(1)read the CIF file, assuming that it follows AMCSD atom naming conventions, and correct the _atom_site_aniso_label values using some heuristics.✨
- cif_fix_AMCSD_atom_labels(1)read the CIF file, assuming that it follows AMCSD atom naming conventions, and correct duplicated _atom_site_label and _atom_site_aniso_label values.✨
- cif_fix_values(1)correct various CIF file values and output the made changes into the standard I/O streams. The script is capable of making these corrections: - Converting temperature from degrees Celsius to kelvins…✨
- cif_guess_AMCSD_atom_types(1)read the CIF file, assuming that it follows AMCSD atom naming conventions, and assign atom types and attached hydrogen counts as follows: - for 'Wat' atoms (with or without a number) assign atom type…✨
- cif_hkl_check(1)check the correspondence between CIF and diffraction data files, taking data block names, cell parameters, author lists and symmetry group names into account.✨
- cif_hkl_COD_number(1)parse a CIF file and print out the essential information in the COD CIF format✨
- cif_list_tags(1)parse CIF file(s) and output a list of CIF data items.✨
- cif_mark_disorder(1)mark disorder in CIF files judging by distance and occupancy.✨
- cif_merge(1)merge data values in identical data blocks of multiple CIFs. Unique data items are combined into a single data block of the output CIF; data items with equivalent values are silently merged into one…✨
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getting it ready, bestie…