section 1 · User commands 💻

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C (continued)

combineKmers(1)basic algorithm to combine kmer counts across samples This program belongs to seer(1) (Sequence Element (kmer) Enrichment Analysis).✨
combineMUMs(1)package for sequence alignment of multiple genomes✨
combinePatchFaces(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
combinesummaries(1)Scalar Summary Combination Tool✨
combostatus(1)Xymon combination test tool✨
combust(1)✨
comdraw(1)drawtool with distributed command interpreter✨
comedi_board_info(1)reports useful information about COMEDI devices✨
comet-ms(1)The comet-ms package ships the comet-ms binary that does MS/MS database searches.✨
CometAdapter(1)library for LC/MS data management and analysis - tools✨
comgeom-g(1)convert GIFT COMGEOM model into MGED database✨
comgt(1)Option GlobeTrotter GPRS/EDGE/3G/HSDPA and Vodafone 3G/GPRS datacard control tool✨
comicthumb(1)Thumbnailer for cbz, cbr and cbt archives.✨
comigrate(1)managing package migrations from Debian unstable to testing✨
comitup-cli(1)command-line interface for comitup network management✨
comm(1)compare two sorted files line by line✨
comma(1)Runs programs without installing them✨
command(1)run a program✨
commander(1)COMMANDER✨
commandline(1)set or get the current command line buffer✨
commit-partial(1)commit patches to Darcs, Git, Mercurial, Bazaar, Monotone, Subversion, or CVS repositories✨
commit-patch(1)commit patches to Darcs, Git, Mercurial, Bazaar, Monotone, Subversion, or CVS repositories✨
commit_agent(1)Generic CTN manual page✨
commix(1)Automated All-in-One OS Command Injection Exploitation Tool✨
common2dlf(1)convert Common Log Format web server log files to www DLF✨
commoncpp-config(1)script to get information about common c++ library✨
commonize(1)JavaScript transpiler to Node-compatible CommonJS✨
commonmark(1)parse Markdown✨
comodoro(1)CLI to manage personal time✨
comodoro-completion(1)Print completion script for a shell to stdout✨
comodoro-manual(1)Generate manual pages to a directory✨
comodoro-server(1)Manage servers✨
comodoro-timer(1)Manage timers✨
comp(1)compose an nmh message✨
comp_err(1)compile MySQL error message file✨
compactor(1)capture DNS traffic and write query/response pair information to file✨
compactsga(1)reads a ChIP-seq data file and merges equal tag positions into a single line✨
compalign(1)compare two multiple alignments✨
compare(1)mathematically and visually annotate the difference between an image and its reconstruction.✨
compare-im6.q16(1)mathematically and visually annotate the difference between an image and its reconstruction.✨
compare-im6.q16hdri(1)mathematically and visually annotate the difference between an image and its reconstruction.✨
compare-im7.q16(1)mathematically and visually annotate the difference between an image and its reconstruction.✨
compare-im7.q16hdri(1)mathematically and visually annotate the difference between an image and its reconstruction.✨
compare_genomes(1)find methylation in nanopore reads✨
compare_hkl(1)compare reflection data✨
compare_octrees(1)Compare two octrees for accuracy / compression✨
compare_scheds(1)compare schedule files generated by schedule✨
compareECL(1)Comparator for Eclipse files✨
comparenodedefs(1)manual page for comparenodedefs 1.39.5✨
comparepdf(1)compare two PDF files textually or visually✨
comparePolishes(1)utilities to work with sim4db-generated alignment files convertPolishes - convert between sim4db and GFF3 formats filterPolishes - filter alignments based on sequence identity, coverage and length…✨
compartment(1)secure program/service wrapper✨
compel(1)✨
compface(1)compress and expand 48x48x1 face image files✨
compgen(1)bash built-in commands, see bash(1)✨
compile_encoding(1)compile XML encmap into a binary encoded file for XML::Parser✨
compile_et(1)error table compiler✨
compiler(1)TTCN-3 and ASN.1 to C++ translator✨
compileserver-3.2.2(1)Helper tool for Free Pascal Compiler (FPC)✨
compileSpliceCands(1)Find introns parsing a set of exon candidates in GFF format✨
compiz(1)OpenGL window and compositing manager✨
compiz-boxmenu(1)control Compiz Boxmenu✨
compiz-boxmenu-daemon(1)the daemon that holds Compiz Boxmenu's menus✨
compiz-boxmenu-dlist(1)tell compiz-boxmenu-daemon to display just a document list✨
compiz-boxmenu-dplist(1)tell compiz-boxmenu-daemon to display just a desktop list✨
compiz-boxmenu-editor(1)edit compiz-boxmenu-daemon's menus.✨
compiz-boxmenu-vplist(1)tell compiz-boxmenu-daemon to display just a viewport list✨
compiz-boxmenu-wlist(1)tell compiz-boxmenu-daemon to display just a window list✨
complete(1)edit command-specific tab-completions✨
complexity(1)Measure complexity of C source✨
complg(1)manual page for complg 2.9.3✨
complyctl(1)compliance assessment CLI using provider-based scanning✨
complyctl-provider-ampel(1)Ampel scanning provider for complyctl✨
complyctl-provider-opa(1)OPA/Conftest scanning provider for complyctl✨
complyctl-provider-openscap(1)OpenSCAP scanning provider for complyctl✨
CompNovo(1)library for LC/MS data management and analysis - tools✨
CompNovoCID(1)library for LC/MS data management and analysis - tools✨
compopt(1)bash built-in commands, see bash(1)✨
compose(1)execute programs via entries in the mailcap file✨
compose-changelog(1)show changes between two composes✨
compose-create-legacy-composeinfo(1)create legacy .composeinfo file✨
compose-diff-rpms(1)show differences between package lists in two composes✨
compose-dump-listings(1)dump package listings from a compose✨
compose-has-build(1)check for existence of a build in a compose✨
compose-list(1)list and query composes in a directory✨
compose-partial-copy(1)copy part of compose to another location✨
compose-print-essentials(1)print basic information about a compose✨
compose-report-package-moves(1)show changes between two composes✨
compose-spec(1)Validates a compose file conforms to the Compose Specification✨
compose-update-latest-symlinks(1)Create the symbolic links of minor and major version to the given latest compose✨
compose-write-repo-file(1)write .repo file pointing to a compose✨
composefs-info(1)print information about a composefs image✨
composeglyphs(1)generate an encoding vector or new font for postscript✨
composer(1)Composer command line interface✨
composer-cli(1)composer commandline tool✨
composer-cli-blueprints(1)Manage blueprints✨
composer-cli-blueprints-changes(1)Show the changes to the blueprints✨
composer-cli-blueprints-delete(1)Delete the blueprint from the server✨
composer-cli-blueprints-depsolve(1)Depsolve the blueprints and output the package lists✨
composer-cli-blueprints-diff(1)list the differences between two blueprint commits✨
composer-cli-blueprints-freeze(1)Show the blueprints depsolved package and module versions✨
composer-cli-blueprints-freeze-save(1)Save the frozen blueprints to a TOML file✨
composer-cli-blueprints-freeze-show(1)Show the complete frozen blueprints TOML format✨
composer-cli-blueprints-list(1)List all of the blueprint names✨
composer-cli-blueprints-push(1)Push the TOML blueprint file to the server✨
composer-cli-blueprints-save(1)Save the blueprints to TOML files✨
composer-cli-blueprints-show(1)Show the blueprints in TOML format✨
composer-cli-blueprints-tag(1)Tag the most recent blueprint change as a release✨
composer-cli-blueprints-undo(1)Undo a blueprint change✨
composer-cli-blueprints-workspace(1)Push the TOML blueprint to the workspace✨
composer-cli-completion(1)Generate the autocompletion script for the specified shell✨
composer-cli-completion-bash(1)Generate the autocompletion script for bash✨
composer-cli-completion-fish(1)Generate the autocompletion script for fish✨
composer-cli-completion-powershell(1)Generate the autocompletion script for powershell✨
composer-cli-completion-zsh(1)Generate the autocompletion script for zsh✨
composer-cli-compose(1)Manage composes✨
composer-cli-compose-cancel(1)Cancel one compose✨
composer-cli-compose-delete(1)Delete one or more composes✨
composer-cli-compose-image(1)Get the compose image file✨
composer-cli-compose-info(1)Show detailed information on the compose✨
composer-cli-compose-list(1)List basic information about composes✨
composer-cli-compose-log(1)Get the log for a running compose✨
composer-cli-compose-logs(1)Get a tar of the the logs for the compose✨
composer-cli-compose-metadata(1)Get a tar of the the metadata for the compose✨
composer-cli-compose-results(1)Get a tar of the the results for the compose✨
composer-cli-compose-start(1)Start a compose using the selected blueprint and output type✨
composer-cli-compose-start-ostree(1)Start an ostree compose using the selected blueprint and output type✨
composer-cli-compose-status(1)List the detailed status of all composes✨
composer-cli-compose-types(1)List the available compose types✨
composer-cli-compose-wait(1)Wait for a compose to finish✨
composer-cli-distros(1)Manage distributions✨
composer-cli-distros-list(1)List the available distributions✨
composer-cli-doc(1)Generate manpage files✨
composer-cli-modules(1)Module related commands✨
composer-cli-modules-info(1)Show detailed info about the listed modules✨
composer-cli-modules-list(1)List all, or search for, available modules✨
composer-cli-projects(1)Project related commands✨
composer-cli-projects-depsolve(1)Show the dependencies of all of the listed projects✨
composer-cli-projects-info(1)Show detailed info about the listed projects✨
composer-cli-projects-list(1)List available projects✨
composer-cli-sources(1)Manage sources✨
composer-cli-sources-add(1)Add a project source to the server✨
composer-cli-sources-change(1)Change a project source✨
composer-cli-sources-delete(1)Delete the project source✨
composer-cli-sources-info(1)Show details about the source✨
composer-cli-sources-list(1)List the available project sources✨
composer-cli-status(1)API server status✨
composer-cli-status-show(1)Show API server status✨
composer-cli-version(1)Display the version and exit✨
composite(1)overlaps one image over another.✨
composite-im6.q16(1)overlaps one image over another.✨
composite-im6.q16hdri(1)overlaps one image over another.✨
composite-im7.q16(1)overlaps one image over another.✨
composite-im7.q16hdri(1)overlaps one image over another.✨
composite_rsr_plot(1)plot spectral responses for a set of satellite imagers✨
compreffor(1)CFF table subroutinizer for FontTools✨
compress(1)compress and expand data✨
compress_gtf(1)component of cufflinks suite✨
compressibleInterDyMFoam(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
compressibleInterFilmFoam(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
compressibleInterFoam(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
compressibleInterIsoFoam(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
compressibleMultiphaseInterFoam(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
comprez(1)safely (un)tar and (de)feather files and directories✨
comps2solv(1)convert rpm-md comps.xml file into a solv file✨
compstruct(1)calculate accuracy of RNA secondary structure predictions✨
comptext(1)GUI-based tool to compare two text streams✨
compton(1)a compositor for X11✨
compton-trans(1)an opacity setter tool✨
comptty(1)GUI-based tool to compare two RTTY text streams✨
compute-theme-d-module-deps(1)compute Theme-D unit dependencies✨
compute-theme-d-pcode-deps(1)compute Theme-D unit dependencies✨
compute-theme-d-program-deps(1)compute Theme-D program dependencies✨
compute_all(1)count source lines of code (SLOC)✨
compute_sloc_lang(1)count source lines of code (SLOC)✨
computeMedians(1)medians calculator for clonalorigin xml files✨
computeSensitivities(1)part of OpenFOAM (The Open Source CFD Toolbox).✨
comskip(1)commercial detector✨
comskip-gui(1)commercial detector✨
comterp(1)distributed command interpreter demonstrator✨
con2fbmap(1)shows and sets mapping between consoles and framebuffer devices.✨
concalc(1)console calculator✨
concavity(1)predictor of protein ligand binding sites from structure and conservation✨
conch(1)Conch SSH client✨
conch-3.13(1)Conch SSH client✨
concordance(1)for programming your Logitech Harmony remote control✨
conda-build(1)conda-build Documentation Conda-build contains commands and tools to build your own conda packages. It also provides helpful tools to constrain or pin versions in recipes. Building a conda package…✨
conda-index(1)conda-index conda index, formerly part of conda-build. Create repodata.json for collections of conda packages. The conda_index command operates on a channel directory. A channel directory contains a…✨
condor_adstash(1)HTCondor Manual✨
condor_advertise(1)HTCondor Manual✨
condor_annex(1)HTCondor Manual Add cloud resources to the pool.✨
condor_check_password(1)HTCondor Manual✨
condor_check_userlogs(1)HTCondor Manual✨
condor_chirp(1)HTCondor Manual✨
condor_config_val(1)HTCondor Manual✨
condor_configure(1)HTCondor Manual✨
condor_continue(1)HTCondor Manual✨
condor_dag_checker(1)HTCondor Manual✨
condor_dagman(1)HTCondor Manual✨
condor_drain(1)HTCondor Manual✨