COMBINEKMERS(1)

💖 COMBINEKMERS 💖

okay bestie, welcome to combineKmers — it lives in the COMBINEKMERS(1) section of the manual, filed under User Commands, and it's here to help you out. ✨

🌸 NAME 🌸

combineKmers — the basic algorithm to combine kmer counts across samples 🧬✨

and like, real talk, this program is part of seer(1) — that's Sequence Element (kmer) Enrichment Analysis, iykyk 👑

🦋 DESCRIPTION 🦋

Okay so here's the whole vibe: it's the basic algorithm to combine kmer counts across samples. That's it, that's the thing. She does one job and she does it 💅

✨ OPTIONS ✨

🎀 Required options:

like, you literally cannot skip these, bestie. non-negotiable. periodt.

• -r [ --samples ] arg — this is your file with tab separated sample name and kmer file. tab. separated. don't be out here using spaces 🙈
• -o [ --output ] arg — your output file prefix 🫶

💜 Other options:

the extras, the little garnish, the main character energy ✨

• --min_samples arg (=1) — the minimum number of samples a kmer must occur in to be printed. and look, the default is 1, so if you say nothing she assumes 1 💫
• -h [ --help ] — full help message. go on, ask her, she'll tell you everything 👑

💀 AUTHOR 💀

This manpage was written by Andreas Tille for the Debian distribution, and can be used for any other usage of the program. iconic of him honestly 🎀

and that's the whole page bestie!! 💖 no cap, that's every single detail.

combineKmers 1.1.2 — March 2017 🌸

mwah, go combine those kmers, you absolute legend 🧚💜