📦 bamkit

7 pages

B

bamcleanheader.py(1)remove illegal and malformed fields from a BAM file's header✨
bamfilterrg.py(1)filter readgroup(s) from a BAM file✨
bamfixflags.py(1)filter readgroup(s) from a BAM file✨
bamgroupreads.py(1)Group BAM file by read IDs without sorting✨
bamheadrg.py(1)Inject readgroup info✨
bamlibs.py(1)output comma delimited string of read group IDs for each library✨
bamtofastq.py(1)Convert a coordinate sorted BAM file to FASTQ✨