BAMLIBS.PY(1)

πŸ“¦ version 0.0.1+git20170413.ccd079d, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu resolute, ubuntu stonking

πŸŽ€ bamlibs.py β€” the manual page, but make it cute πŸŽ€

okay bestie, so this is the manpage for bamlibs.py, a lil User Command in section 1 of the manual. it does exactly one thing and it does it slayfully. let's get into it πŸ’…


✨ NAME ✨

bamlibs.py β€” output comma delimited string of read group IDs for each library

🌸 SYNOPSIS 🌸

bamlibs.py [-h] [-S] [input]

πŸ’– DESCRIPTION πŸ’–

bestie. listen. it outputs a comma delimited string of read group IDs for each library. that's the whole vibe. that's the assignment. and it ATE. πŸ”₯

πŸ‘‘ OPTIONS πŸ‘‘

positional arguments 🫢

  • input β€” the SAM/BAM file to inject header lines into. and if you pass - or just... don't pass anything at all? it defaults to stdin. no cap. πŸ™ˆ

optional arguments ✨

  • -h, --help β€” show this help message and exit. the classic. the icon. the one we all press when we're lost (which is always). 😭
  • -S, --is_sam β€” input is SAM. that's it, that's the whole flag. it's giving "short and honest". πŸ’œ

🌈 AUTHOR 🌈

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. we love a generous king for that fr fr πŸ‘‘


and that's the whole page, bestie! go forth and comma-delimit those read group IDs πŸ¦‹

okay so the lil sign-off at the bottom of the original says this is bamlibs.py version 0.0.1+git20170413.cc... and it's dated June 2020. so like, vintage but still valid. periodt. πŸ’–βœ¨πŸŽ€