VCFGLXGT(1)

💅 vcfglxgt — the vcfglxgt(1) glow-up

okay bestie, so this is the manual page for vcfglxgt, part of the vcfglxgt (VCF transformation) situation, section 1 of the manual. it's a whole vibe and i'm gonna walk you through it 🎀

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✨ NAME ✨

vcfglxgt — that's it, that's the name, no cap 💖

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🌸 SYNOPSIS 🌸

vcfglxgt options

literally just the program plus whatever options you're feeling, slay ✨

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🦋 DESCRIPTION 🦋

so what does it actually DO? it sets genotypes using the maximum genotype likelihood for each sample. like, for every sample, it looks at the likelihoods and picks the genotype with the biggest one. main character selection energy fr fr 👑

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💖 OPTIONS 💖

here's the menu, bestie:

• options: — yes babe, the list of options, iconic
  • -n, --fix-null-genotypes — only apply this whole thing to null and partly-null genotypes. so if you don't want it touching the genotypes that are already perfectly fine, this is your girl 🫶

Type: transformation — that's what kind of tool this is, iykyk 💅

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🔥 EXIT VALUES 🔥

• 0 — Success. we ate. no crumbs. 🎉
• not 0 — Failure. 😭 it's giving tragedy, try again

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🌈 SEE ALSO 🌈

• vcflib(1) — the whole fam, go check it out 💜

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👑 OTHER 👑

📜 LICENSE 📜

Copyright 2011-2024 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2024 (C) Pjotr Prins.

fr fr keep this intact, it's the legal tea and it matters 💀

✍️ AUTHORS ✍️

Erik Garrison and vcflib contributors. absolute legends, we stan 🌟

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and that's the whole page, bestie! this was vcfglxgt (vcflib) — go forth and set those genotypes, periodt 💖✨🎀