VCFCLASSIFY(1)

πŸ“¦
version 1.0.12 Β· 3 versions
, in debian trixie, ubuntu questing, ubuntu resolute, ubuntu stonking

πŸ’– vcfclassify β€” the vcfclassify(1) manual, but make it cute πŸ’–

okay bestie, welcome to the vcfclassify page of the vcfclassify (VCF transformation) manual, section 1 πŸŽ€ yes that's the header, we're folding it in like a lil bookmark, moving on πŸ’…


✨ NAME ✨

vcfclassify β€” that's the whole name, short and iconic, no notes πŸ‘‘


🌸 SYNOPSIS 🌸

vcfclassify

that's it. that's the whole vibe. she takes no arguments in the synopsis and she's not sorry πŸ¦‹


πŸ’œ DESCRIPTION πŸ’œ

so what does she DO? bestie. she creates a new VCF ✨ β€” a fresh one, brand new, no cap β€” and in that new VCF, each variant gets tagged by its allele class 🏷️

and the allele classes she'll hit you with are:

  • snp
  • ts/tv
  • indel
  • mnp

that's the assignment. each variant, tagged, by class. periodt πŸ’…


πŸŽ€ OPTIONS πŸŽ€

  • Type: transformation β€” yeah that's literally the only line here, she's a transformation type of girlie, that's her whole personality and honestly? obsessed 🫢

πŸ“ EXIT VALUES πŸ“

  • 0 β€” Success πŸ’– everything went great, she ate, no crumbs.
  • not 0 β€” Failure 😭 something went sideways, vibe check failed, go read your stderr.

🌈 SEE ALSO 🌈

  • vcflib(1) β€” go say hi to the whole family, they're all so talented, iykyk πŸ’œ

🧚 OTHER 🧚

πŸ“œ LICENSE πŸ“œ

Copyright 2011-2024 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2024 (C) Pjotr Prins.

so basically: MIT licensed, free to use, iconic behaviour from everyone involved, we love to see it ✨

πŸ‘‘ AUTHORS πŸ‘‘

Erik Garrison and vcflib contributors. absolute legends, every single one of them, thank you for your service πŸ«‘πŸ’–


and that's the whole page bestie!! this was the vcfclassify (vcflib) manual page, and the lil sign-off footer was giving source + version + date energy, so here it is, cutely: πŸ’Œ vcfclassify, from vcflib, dated like the footer of the original page πŸ’Œ mwah, go classify some variants, you're gonna slay πŸŒΈπŸ’…βœ¨

πŸ“¦ where this page comes from