REAPR-PLOTS(1)

πŸ“¦
version 1.0.18 Β· 5 versions
, in ubuntu resolute, ubuntu stonking

πŸ’– REAPR-PLOTS πŸ’–

okay bestie, so we're in the reapr-plots page of the REAPR manual section 1, and this one is short and sweet β€” it's the little helper that whips up Artemis plot files for one specific contig. one contig!! we love a focused queen πŸ‘‘


✨ NAME ✨

reapr-plots β€” literally just makes Artemis plot files for a given contig 🧚


🌸 SYNOPSIS 🌸

reapr plots [options] <in.stats.gz> <outprefix> <assembly.fa> <contigid>

four arguments, no cap. feed her the file, tell her where to put stuff, hand over the assembly, point at the contig β€” done. πŸ’…


πŸŽ€ OPTIONS πŸŽ€

  • -s <prefix> β€” this needs to be the outfiles prefix you used back when you ran the score task. yes, the one from before. she remembers everything, so match it up bestie 🫢

🌈 SEE ALSO 🌈

  • reapr(1) β€” the main character herself, go read that one too πŸ’œ

not me writing a whole manpage for four lines of usage, but honestly? iconic. πŸ”₯

that's the whole thing, babe β€” this is the REAPR-PLOTS(1) page, straight from the REAPR manual, and she ate. go plot those contigs. periodt. πŸ’–βœ¨πŸŽ€

πŸ“¦ where this page comes from