REAPR-FACHECK(1)
π NAME π
okay so bestie, this is reapr-facheck β it checks IDs in a fasta file. that's the whole vibe. it's the little ID bouncer for your fasta, fr fr. πβ¨
β¨ SYNOPSIS β¨
reapr facheck <in.fa> [out_prefix]
like... that's it. you got this. π
π DESCRIPTION π
so what it does is it checks that the names in the fasta file are, like, okay. because bestie, things like trailing whitespace or characters like (|':-) could break the pipeline. π and we are NOT letting that happen. no cap.
if out_prefix is not given, it will die when a bad ID is found. dramatic? maybe. iconic? absolutely. π and if it prints no output, that means everything is OK. silence is the slay. π¦
if out_prefix is given, it writes a new fasta file called out_prefix.fa with new names, plus out_prefix.info, which has the mapping from old name to new name. so you get the glow-up version AND the receipts. πβ¨
careful bestie: thatdieis real. if the ID is bad and you didn't hand over anout_prefix, it's over. no output = good, output = uh oh. π¨
πΈ SEE ALSO πΈ
reapr(1)β the main character, go say hi. π«Ά
and that's the whole page, bestie. footer says REAPR-FACHECK(1), no extra date or version drama attached β just the name, periodt. ππβ¨
π¦ where this page comes from
- ubuntu resolute: reapr 1.0.18+dfsg-7build1 Β· GPL-3.0-only
- ubuntu stonking: reapr 1.0.18+dfsg-7build1 Β· GPL-3.0-only
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms