CHANGE_PAIRED...D_ORIENTATION(1)

💖 CHANGE_PAIRED_READ_ORIENTATION 💖

okay bestie, welcome to the group chat, the topic today is change_paired_read_orientation — a lil section-1 User Commands baddie whose whole entire job is reversing the orientation of each paired-end FASTA sequence. that's it. that's the gig. she flips, she slays, she goes home. 🦋

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✨ NAME ✨

change_paired_read_orientation — reverses the orientation of each paired-end FASTA sequence. no cap, that's literally the whole personality. 💅

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🌸 DESCRIPTION 🌸

🎀 Usage:

here's the vibe, all the ways you can summon her:

change_paired_read_orientation <in_fasta> <out_fasta>
change_paired_read_orientation --help
change_paired_read_orientation --man
change_paired_read_orientation --usage
change_paired_read_orientation --version

like, either you hand her two files and she does the thing, or you ask her a question about herself (--help, --man, --usage, --version) and she spills. main character energy fr fr. 👑

🧚 Required arguments:

these two are not optional, bestie. she needs both or she's just standing there. 🙈

• <in_fasta> — the FASTA file containing the reads to re-orient. this is the input, the raw material, the before picture. 📸
• <out_fasta> — the Output FASTA file where to write the reads. this is where the glow-up gets saved. don't skip her. 🫶

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👀 SEE ALSO 👀

go read her friends too, they're all iconic in their own ways:

• grinder(7)
• grinder(1)
• average_genome_size(1)
• change_paired_read_orientation(1)

iykyk. ✨

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and that's the whole page, babe — change_paired_read_orientatio... from December 2020, living in section 1 under User Commands. she's been here since 2020 and she's still reversing orientations like a legend. stan. 💜🎀