AVERAGE_GENOME_SIZE(1)

✨ NAME ✨

average_genome_size — bestie, this is the lil tool that calculates the average genome size in Grinder libraries 💖

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🦋 DESCRIPTION 🦋

Okay so like, this is from the User Commands section of the manual, and it does exactly one (1) thing and it does it gorgeously: you hand it your files, it tells you the average genome size of your Grinder library. Lowkey iconic. ✨

🌸 Usage:

average_genome_size <db_fasta> <rank_file>
average_genome_size --help
average_genome_size --man
average_genome_size --usage
average_genome_size --version

🎀 Required arguments:

• <db_fasta> — the FASTA file holding all the full-genomes that were used to produce the Grinder library. Yes bestie, this one is mandatory, no skipping 🙈
• <rank_file> — the Grinder rank file that describes the library composition. Also mandatory. It's giving "you need both of us to make this work" 🫶

fr fr, both arguments are required. The tool will not vibe with you if you leave one out.

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💜 SEE ALSO 💜

Go check out these queens too:

• grinder(7)
• grinder(1)
• average_genome_size(1)
• change_paired_read_orientation(1)

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And that's the whole thing, bestie — average_genome_size 0.5.4, dated December 2020 👑 mwah, love u, go calculate those averages 💅🌸