VFDBGENUS(1)

✨ VFDBGENUS(1) — User Commands ✨

Okay bestie, the VFDBgenus manual is here and it is giving main character energy 💖 It's a tool from the SRST2 suite that pulls virulence genes out of the VFDB database by genus. Let's go 🫶

📖 NAME

VFDBgenus — extract virulence genes by genus from the VFDB database 🧚

🎀 SYNOPSIS

VFDBgenus [-h] --infile INFILE [--genus GENUS]

💅 DESCRIPTION

Okay so this tool is part of the SRST2 suite, no cap ✨

It pulls virulence genes by genus out of the VFDB database, which you can grab from http://www.mgc.ac.cn/VFs/Down/CP_VFs.ffn.gz 🌸

🦋 OPTIONS

optional arguments:

• -h, --help — show this help message and exit 💜
• --infile INFILE — this is where you feed it the raw VFDB sequences file. It needs to be fasta, and you can download it from http://www.mgc.ac.cn/VFs/Down/CP_VFs.ffn.gz 🍓
• --genus GENUS — the genus you want to extract. If you skip this one, it'll extract all the genera, each into its own individual file 🌈

🫶 AUTHOR

This manpage was written by Andreas Tille for the Debian distribution, and it can be used for any other usage of the program. Iconic behaviour from Andreas 👑

Source: VFDBgenus 0.1.8, June 2016. Stay iconic, bestie, and go slay your genes 💅🔥✨