📦 sga

5 pages

S

  • sga(1)String Graph Assembler: de novo genome assembler that uses string graphs✨
  • sga-align(1)align reads to contigs✨
  • sga-astat(1)Compute Myers' a-statistic for a set of contigs using the read alignments in in.bam✨
  • sga-bam2de(1)Make a distance estimate file from a bam file of reads aligned to contigs✨
  • sga-mergeDriver(1)generate sga merge commands from a list of files✨