📦 mummer

C

• combineMUMs(1)package for sequence alignment of multiple genomes✨

D

• delta-filter(1)read a delta alignment file from either nucmer or promer and filters the alignments✨
• delta2blocks(1)extra tool for mummer from patch of mugsy to sort alignments delta2maf - extra tool for mummer from patch of mugsy to sort alignments✨
• delta2maf(1)extra tool for mummer from patch of mugsy to sort alignments delta2maf - extra tool for mummer from patch of mugsy to sort alignments✨
• dnadiff(1)package for sequence alignment of multiple genomes✨

E

• exact-tandems(1)package for sequence alignment of multiple genomes✨

G

• gaps(1)package for sequence alignment of multiple genomes✨

M

• mapview(1)package for sequence alignment of multiple genomes✨
• mgaps(1)package for sequence alignment of multiple genomes✨
• mummer(1)package for sequence alignment of multiple genomes✨
• mummer-annotate(1)package for sequence alignment of multiple genomes✨
• mummerplot(1)package for sequence alignment of multiple genomes✨

N

• nucmer(1)package for sequence alignment of multiple genomes✨
• nucmer2xfig(1)package for sequence alignment of multiple genomes✨

P

• promer(1)package for sequence alignment of multiple genomes✨

R

• repeat-match(1)package for sequence alignment of multiple genomes✨
• run-mummer1(1)package for sequence alignment of multiple genomes✨
• run-mummer3(1)package for sequence alignment of multiple genomes✨

S

• show-aligns(1)package for sequence alignment of multiple genomes✨
• show-coords(1)package for sequence alignment of multiple genomes✨
• show-diff(1)show diff information (part of mummer package)✨
• show-snps(1)package for sequence alignment of multiple genomes✨
• show-tiling(1)package for sequence alignment of multiple genomes✨