Bio::T...ectTags(3pm)

✨ NAME ✨

Bio::Tradis::DetectTags — it detects tr tags in a BAM file, bestie 💖 that's the whole gig, and it does it flawlessly

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🎀 VERSION 🎀

version 1.4.5 — yes she's got a version number, she's official 💅

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🦋 SYNOPSIS 🦋

okay so real talk: this module's entire job is detecting whether tr/tq tags are present in BAM files that came out of Tradis analyses. That's it. That's the vibe check. 🌸

use Bio::Tradis::DetectTags;

my $pipeline = Bio::Tradis::DetectTags->new(bamfile => 'abc');
$pipeline->tags_present();

Look at her. Two lines of actual work and she's already carrying the whole analysis. Main character energy fr fr 👑

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🌈 NAME 🌈

Bio::Tradis::DetectTags

(yes the NAME section shows up twice, no that's not a glitch, that's just how the manpage is structured, and we respect the structure in this house 🫶)

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💜 PARAMETERS 💜

Required

• bamfile — the path to / name of the file you want checked 👀 like, hand her the file, she'll look at it, no notes

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⭐ METHODS ⭐

• tags_present — returns true if TraDIS tags are detected in bamfile ✨ like it literally just tells you yes or no, that's the entire personality and honestly? iconic

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🌸 AUTHOR 🌸

Carla Cummins <path-help@sanger.ac.uk> — give her her flowers 💐

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👑 COPYRIGHT AND LICENSE 👑

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007

so like, go forth and remix, but legally, with the license text attached 💖

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ngl there is nothing dangerous in here. No undefined behaviour. No deprecated flags lurking in the shadows. Just a tiny module that checks for tags and minds her own business. A safe queen. 🧚

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and that's the whole page, bestie!! no cap, every flag, every param, every line accounted for 🎀

written up in the User Contributed Perl Documentation for Bio::Tradis::DetectTags(3pm), built against perl v5.30.0, dated 2020-01-11 — mwah, slay, periodt 💅💖