Bio::T...:Match(3pm)

💖 Bio::Tools::Motif::Match(3pm) 💖

okay bestie, listen up — this is a little Perl module from the Bio::Tools::Motif family, and its whole entire job is to be the match object. Like, when Bio::Tools::Motif goes hunting through your sequence and finds something, this is the cute little container it hands you back. It's giving ✨receipt✨ but make it biology.

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🌸 NAME 🌸

Bio::Tools::Motif::Match — the class that represents a match as reported by the Bio::Tools::Motif module. no cap, that's literally it, that's the whole vibe. 💅

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🦋 SYNOPSIS 🦋

okay so here's how you actually use it, bestie:

use Bio::Tools::Motif::Match;

# Create a new object.
$match = new Bio::Tools::Motif::Match(-motifid => 'P07110',
                                      -localization => 'OuterMembrane',
                                      -comment => 'FIMBRIAL_USHER Pattern',
                                      -start => 314,
                                      -end => 325);

# Accessor methods.
$val = $match->motif_id();
$val = $match->localization();
$val = $match->comment();
$val = $match->start();
$val = $match->end();

iconic, right?? you build the thing with the constructor, then you use the accessor methods to get your lil facts back out. that's the whole loop. periodt. 🎀

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👑 AUTHOR 👑

Cory Spencer <cspencer@sfu.ca> — the main character who wrote this. show some respect. 🫶

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🔥 SEE ALSO 🔥

• Bio::Tools::Motif — the parent-ish module that makes these match objects and reports them. go check it out, iykyk. 💖

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🎀 ACKNOWLEGEMENTS 🎀

(yes bestie, that heading is spelled exactly like that, we do not touch it, we do not fix it, we love it as it is 💜)

thanks go out to Fiona Brinkman, Jennifer Gardy and the other members of the Simon Fraser University Brinkman laboratory. absolute legends, the whole lab. 🌈⭐

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ngl this page is short but it ate. every flag, every method, every name — all present and accounted for, fr fr. 💯

and that's a wrap on the documentation for perl v5.34.0, dated 2022-02-06, from the Bio::Tools::Motif::Match(3pm) page — mwah, go forth and match some motifs bestie 💅✨🦋