Bio::D...anger22(3pm)

💖 Bio::D...anger22(3pm) 💖

okay bestie, welcome to Bio::DB::GFF::Aggregator::ucsc_sanger22 — yes that's the full name, and yes it's a mouthful, but she's the UCSC sanger22 aggregator and she's here to do exactly one job. This page is part of the User Contributed Perl Documentation, and honestly? iconic of her. 🎀

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✨ NAME ✨

Bio::DB::GFF::Aggregator::ucsc_sanger22 — the UCSC sanger22 aggregator. that's it, that's the whole name, no notes. 💅

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🌸 SYNOPSIS 🌸

here's the vibe, bestie — you load up Bio::DB::GFF, open your sequence database, and let the aggregator do her thing:

use Bio::DB::GFF;

# Open the sequence database
my $db      = Bio::DB::GFF->new( -adaptor => 'dbi:mysql',
                                 -dsn     => 'dbi:mysql:elegans42',
                                 -aggregator => ['transcript','clone'],
                               );

-------------------------------------------------
Aggregator method: sanger22
Main method:       transcript
Sub methods:       sanger22
-------------------------------------------------

see that little cheat-sheet at the bottom? that's the whole personality right there:

• Aggregator method: sanger22
• Main method: transcript
• Sub methods: sanger22

periodt. 💜

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🦋 DESCRIPTION 🦋

Bio::DB::GFF::Aggregator::transcript

(yes that's what the original says, and we respect her even if she's a little chaotic 🙈)

🎀 method

• Title: method
• Usage: $aggregator->method
• Function: return the method for the composite object
• Returns: the string "sanger22"
• Args: none
• Status: Public

🎀 part_names

• Title: part_names
• Usage: $aggregator->part_names
• Function: return the methods for the sub-parts
• Returns: empty list
• Args: none
• Status: Public

🎀 main_name

• Title: main_name
• Usage: $aggregator->main_name
• Function: return the method for the main component
• Returns: the string "transcript:sanger22"
• Args: none
• Status: Public

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💀 BUGS 💀

None reported. she's clean, she's unbothered, she's thriving. ✨ (not me being suspicious of a bug-free aggregator though...)

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👑 SEE ALSO 👑

go read these next, bestie, they're the whole friend group:

• Bio::DB::GFF
• Bio::DB::GFF::Aggregator

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💖 AUTHOR 💖

Allen Day <allenday@ucla.edu>.

Copyright (c) 2002 Allen Day, University of California, Los Angeles.

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

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and that's the whole page, bestie 🫶 this little beauty ships with perl v5.30.0 and was dated 2020-01-13 — so go forth, aggregate your sanger22s, and slay. 💅🌟