BP_TAXID4SPECIES(1p)

💖 BP_TAXID4SPECIES 💖

okay bestie, so this is bp_taxid4species, a lil Perl script living its best life in the User Contributed Perl Documentation section of the manual (that's the 1p vibe, iykyk). no cap, it's a whole manual page. 🎀

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✨ NAME ✨

bp_taxid4species — a simple script that hands you back the NCBI Taxonomic id for whatever species you asked about. literally that's it, that's the whole job. 🦋

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🌸 SYNOPSIS 🌸

bp_taxid4species [-v] [-p] [-h] "Genus1 species1" "Genus2 species2"

and the options, periodt:

• -v — verbose
• -p — plain
• -h — help

so you just toss in your organisms in quotes, "Genus species" style, and it does the thing. 💅

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👑 DESCRIPTION 👑

okay so this simple script is out here showing you how to grab the taxa id from NCBI Entrez — a whole little demo, honestly — and it'll return a list of taxa ids for all the organisms you requested. multiple species? it's got you. one species? also got you. 🫶

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💌 FEEDBACK 💌

📬 Mailing Lists

user feedback is an integral part of the evolution of this and other Bioperl modules — like genuinely, it's how the whole thing grows. so pls send your comments and suggestions (preferably 💖) to the Bioperl mailing list. your participation is much appreciated. no fr, we love to see it.

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

🐛 Reporting Bugs

found a bug? 😭 first of all, relatable. report bugs to the Bioperl bug tracking system so we can keep track of the bugs and their resolution — that's literally the whole point of it. bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

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🎀 AUTHOR 🎀

Jason Stajich — jason-at-bioperl-dot-org 💜 (yes bestie, that's an at and a dot spelled out, we keep it cute and un-spammable)

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that's the whole page, bestie — brought to you by perl v5.32.1, dated 2021-08-15, and living under BP_TAXID4SPECIES(1p) like the icon it is. slay, go get those tax ids. 🌈✨👑