BP_SEQCONVERT(1p)

πŸ“¦
version 1.7.8 Β· 3 versions
, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble

πŸ’– bp_seqconvert β€” bestie's guide to the sequence format converter πŸ’–

okay so like. this is bp_seqconvert, the generic BioPerl sequence format converter. it's giving "glow-up station for your sequence files" ✨


🌸 SYNOPSIS 🌸

bp_seqconvert --from in-format --to out-format < file.in-format > file.out-format
# or
bp_seqconvert -f in-format -t out-format < file.in-format > file.out-format

like literally that's it. files in, files out, formats swapped. slay πŸ’…


πŸ¦‹ DESCRIPTION πŸ¦‹

bestie, listen. this script is just a lil command line interface to BioPerl's Bio::SeqIO. that's the whole vibe. no cap 🫢


πŸ‘‘ SEE ALSO πŸ‘‘

  • Bio::SeqIO
  • bp_sreformat.PLS β€” for similar functionality, and the way that it also supports AlignIO?? iconic. πŸ’œ

πŸ’Œ FEEDBACK πŸ’Œ

πŸŽ€ Mailing Lists πŸŽ€

user feedback is, like, an integral part of the evolution of this and other Bioperl modules, fr fr. send your comments and suggestions preferably to the Bioperl mailing list. your participation is much appreciated β€” not me being emotionally invested in your emails but here we are πŸ˜­πŸ’–

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

πŸ› Reporting Bugs πŸ›

report bugs to the Bioperl bug tracking system so they can keep track of the bugs and their resolution. bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues
lowkey a public service announcement: if you find a bug, tell them!! they wanna know!! πŸ’€βœ¨

🌈 AUTHOR - Philip Lijnzaad 🌈

email <p.lijnzaad-at-med.uu.nl> β€” go off, king πŸ‘‘


and that's the whole page, bestie!! this gorgeous lil number came from perl v5.32.1, dated 2021-08-15, and it's filed under BP_SEQCONVERT(1p) in the user contributed perl documentation section πŸ«ΆπŸŒΈπŸ’… stay converting, stay cunty, mwah πŸ’‹

πŸ“¦ where this page comes from