WOBBLE(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

💖 WOBBLE(1e) — the manual page bestie 💖

okay so. welcome to the wobble page, part of the EMBOSS manual for Debian. buckle up, it's cute and it's short. 🎀

✨ NAME ✨

wobble — plot third base position variability in a nucleotide sequence 🧬✨

🌸 SYNOPSIS 🌸

wobble -sequence sequence [-window integer] -bases string -graph xygraph
       -outfile outfile

wobble -help

that's the whole vibe. -sequence is mandatory, -window is optional (she's in brackets, she's chill), and -bases, -graph and -outfile are all required, no cap. 💅

🦋 DESCRIPTION 🦋

so wobble is a command line program from EMBOSS — and if you don't know, EMBOSS stands for “the European Molecular Biology Open Software Suite”. iconic acronym, honestly.

she lives in the "Nucleic:Gene finding" command group(s). that's her little friend group. 👑

💅 OPTIONS 💅

🌈 Input section

  • -sequence sequence — hand her a nucleotide sequence, that's the whole point. it's the one thing she actually needs. 🫶

⭐ Additional section

  • -window integer — the window size, bestie. if you don't say anything she defaults to 30. don't come for her, she picked a good number.

🧚 Advanced section

  • -bases string — which bases you're wobble-checking. default value is GC. you can change it but like, GC is the moment. 💜

🎀 Output section

  • -graph xygraph — where the plot goes. it's giving xygraph energy.
  • -outfile outfile — and this is the outfile. the file you out. 📁

😭 BUGS 😭

found a bug? don't suffer in silence, tell someone. bugs can be reported to the Debian Bug Tracking system at http://bugs.debian.org/emboss, or you can go straight to the EMBOSS developers at http://sourceforge.net/tracker/?group_id=93650&atid=605031.

fr fr, report them. they cannot fix what they do not know about. 💀

👀 SEE ALSO 👀

wobble is fully documented via the tfm(1) system. go read that if you want the deep lore. 📚

🫶 AUTHOR 🫶

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page. (so like, they made the machine that made this. meta. 🔥)

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. 🌸

🌟 the sign-off 🌟

this was EMBOSS 6.4.0, dated 05/11/2012, and you just read the WOBBLE(1e) page. periodt. 💅✨🎀 go plot some third base position variability, bestie, you're gonna slay. 🦋💜

📦 where this page comes from