TMAP(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

💖 TMAP — aka tmap(1e) 💖

okay bestie, sit down, hydrate, and let me tell you about tmap, living in section 1e of the manual, because this little program is genuinely so useful and nobody talks about it enough. it's giving transmembrane prediction realness ✨

✨ NAME ✨

tmap — Predict and plot transmembrane segments in protein sequences 🧚

🎀 SYNOPSIS 🎀

tmap -sequences seqset -graph xygraph -outfile report

tmap -help

🦋 DESCRIPTION 🦋

tmap is a command line program from EMBOSS, which stands for “the European Molecular Biology Open Software Suite” 💅 no cap, that's the whole name.

she belongs to the "Protein:Functional sites" command group(s), so if you're out here hunting for functional sites in proteins, you're literally in the right place 🫶

🌸 OPTIONS 🌸

💜 Input section 💜

  • -sequences seqset — the file containing a protein sequence alignment. yeah bestie, alignment, not just one lonely sequence 🍓

💜 Output section 💜

  • -graph xygraph — your graph output, an xygraph, iconic ✨
  • -outfile report — your report output file, an report 💖

💀 BUGS 💀

found a bug? 😭 don't suffer in silence, report it:

fr fr, they want to know. bugs reported are bugs fixed, periodt 👑

🌈 SEE ALSO 🌈

tmap is fully documented via the tfm(1) system. so if you need the deep lore, tfm(1) has you covered, iykyk 📖

👑 AUTHOR 👑

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page. yes, a script did this. she's automated and she ate 💅

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.

EMBOSS 6.4.0 🌟 05/11/2012 🌟 TMAP(1e)

and that's the whole page, bestie 🫶 go forth, predict those transmembrane segments, and stay hydrated 💖✨🎀🦋🌸

📦 where this page comes from