TAXSEQ(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

💖 TAXSEQ(1e) — the manual page, but make it make sense 💖

okay bestie, so taxseq is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"), and it lives in the "Edit" command group(s). Her whole job? Identify sequence entries containing taxonomy IDs. That's it, that's the gig. Slay. ✨

🦋 SYNOPSIS 🦋

the whole vibe, verbatim:

taxseq -sequence seqall -ids string -outfile outfile

and if you just need a little help, no shame:

taxseq -help

🌸 DESCRIPTION 🌸

taxseq is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"). She's part of the "Edit" command group(s). Not me being a whole taxonomy-filtering icon 💅

✨ OPTIONS ✨

🎀 Input section

  • -sequence seqall — your sequence input, bestie. This is where the sequences come from.
  • -ids string — the taxonomy IDs you're hunting for, as a string. This is the "who are we looking for" part of the mission. 🔍

💜 Required section

okay so this section is literally empty. no options listed here. nothing to see. we move. 🫶

🌈 Additional section

also empty!! zero options, zero notes. iconic in its minimalism honestly.

⭐ Advanced section

empty too. the void. the silence. the calm. 🙈

🍓 Output section

  • -outfile outfile — the list of sequence names will be written to this list file. so like, that's your output, that's where the results live. 💖

💀 BUGS 💀

found a bug? (not me manifesting that, but fr fr if you do) — bugs can be reported to the Debian Bug Tracking system at http://bugs.debian.org/emboss, or you can go directly to the EMBOSS developers at http://sourceforge.net/tracker/?group_id=93650&atid=605031. they wanna hear about it, periodt.

👑 SEE ALSO 👑

taxseq is fully documented via the tfm(1) system. so if you need the deep lore, that's where it's at. iykyk ✨

🧚 AUTHOR 🧚

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page. (yes, a script wrote this. and honestly? she ate. 🔥)

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. no cap, same terms, same energy.

and that's the whole page bestie 🫶 this was EMBOSS 6.4.0, dated 05/11/2012, and you were reading TAXSEQ(1e). go forth and identify those sequence entries. mwah. 💅💖

📦 where this page comes from