SIGCLEAVE(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

SIGCLEAVE(1e) — signal cleavage sites, but make it a whole vibe 💅

okay bestie, sit down, grab your iced coffee, because we're talking about sigcleave, a little legend from the EMBOSS family of command line programs. That's “the European Molecular Biology Open Software Suite” for those of you keeping score at home. ✨

And what does it do? It reports on signal cleavage sites in a protein sequence. That's it. That's the whole job. And it does it flawlessly, no cap. 🧚

Oh and also? It's part of the "Protein:Functional sites,Protein:Motifs" command group(s). Very niche, very specific, very her. 👑

🌸 SYNOPSIS 🌸

sigcleave -sequence seqall -minweight float [-prokaryote boolean]
          -outfile report

sigcleave -help

literally just tell it your sequence, tell it your weight threshold, point it at an output file, and go. 🫶

💖 DESCRIPTION 💖

sigcleave is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It lives in the "Protein:Functional sites,Protein:Motifs" command group(s), which is giving extremely specific girlboss energy and we respect it.

If you're the kind of person who runs things in a terminal instead of clicking around a GUI — first of all, iconic — this is your girl. 💅

✨ OPTIONS ✨

🎀 Input section

  • -sequence seqall — your protein sequence goes here. The input. The moment. The main character. 🌸

💜 Required section

  • -minweight float — the minimum scoring weight value for the predicted cleavage site. Lower it and you'll get more sites; that's not a claim I'm making, that's just how minimums work, bestie. Default value: 3.5. 📏

🦋 Additional section

  • -prokaryote boolean — tells the program that your sequence is prokaryotic, and changes the default scoring data file name. Little flag, big consequences. 🦠

👑 Output section

  • -outfile report — where the report goes. Your results, your trophy, your scrapbook page. 💖

💀 BUGS 💀

Found a bug? Not the vibe, but okay, let's handle it. Report it to the Debian Bug Tracking system at http://bugs.debian.org/emboss, or go straight to the EMBOSS developers at http://sourceforge.net/tracker/?group_id=93650&atid=605031.

Please don't suffer in silence, bestie. The maintainers want to know. 🥺

🌈 SEE ALSO 🌈

sigcleave is fully documented via the tfm(1) system. So if you want the full lore, that's your next stop. iykyk 📚

🫶 AUTHOR 🫶

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page.

shoutout to the automation, honestly. she's doing her best and her best is great. ✨

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. periodt. 📜

and that's the whole page, bestie — this was the EMBOSS 6.4.0 manual for SIGCLEAVE(1e), dated 05/11/2012. go report on some cleavage sites, you absolute legend. mwah 💋🌸💖

📦 where this page comes from