PROPHET(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

✨ PROPHET ✨

ok bestie, welcome to prophet from the EMBOSS manual (Debian flavour) 💖

🌸 NAME 🌸

prophet — scan one or more sequences with a Gribskov or Henikoff profile 🧬✨

🎀 SYNOPSIS 🎀

prophet -sequence seqall -infile infile -gapopen float -gapextend float
        -outfile align

prophet -help

🦋 DESCRIPTION 🦋

so prophet is a command line program from EMBOSS, aka “the European Molecular Biology Open Software Suite”. no cap, that's the whole vibe 💅

it lives in the command group(s) "Nucleic:Profiles,Protein:Profiles" — she's a profiles girlie, that's her whole thing 🫶

⭐ OPTIONS ⭐

💜 Input section

  • -sequence seqall — the sequence(s) you're feeding in, bestie 🍓
  • -infile infile — your profile goes here 📂

💜 Required section

  • -gapopen float — gap opening penalty. default value: 1.0 🌈
  • -gapextend float — gap extension penalty. default value: 1.0 🌈
fr fr these two are in the Required section, so don't be skipping them 🙈

💜 Output section

  • -outfile align — where the alignment lands. the moment of truth 👑

💀 BUGS 💀

found a bug? iconic of you to notice, honestly. bugs can be reported to the Debian Bug Tracking system at http://bugs.debian.org/emboss, or you can go straight to the EMBOSS developers at http://sourceforge.net/tracker/?group_id=93650&atid=605031 🐛✨

🧚 SEE ALSO 🧚

prophet is fully documented via the tfm(1) system. iykyk 📖

🌈 AUTHOR 🌈

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page. (yes, a script wrote her. still ate. 💅)

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. 📜

ok that's the whole page, you're so welcome 🫶 this was EMBOSS 6.4.0, dated 05/11/2012, and prophet is PROPHET(1e) — slay, periodt 💖✨🎀

📦 where this page comes from