PREG(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

✨ PREG(1e) ✨

okay so bestie, this is the EMBOSS Manual for Debian page for preg, and we're gonna make it make sense, fr fr 💖

🌸 NAME 🌸

preg — regular expression search of protein sequence(s) 🧬🔍✨

Like, you got a protein sequence, you got a regex, and preg is the bestie that goes "say less" and finds the matches for you. Obsessed.

🎀 SYNOPSIS 🎀

preg -sequence seqall -pattern regexp -outfile report
preg -help

Two moods: full-on search mode, or just asking for help. Both iconic. 💅

🦋 DESCRIPTION 🦋

preg is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"). 🌈

It is part of the "Protein:Motifs" command group(s). So if you're living in protein-motif land, this is your girlie. 👑

✨ OPTIONS ✨

🍓 Input section

  • -sequence seqall — the protein sequence(s) you want to search. Give her the goods, bestie. 🧬
  • -pattern regexp — your regular expression, i.e. the pattern you're hunting for. Slap that regex in here and she'll go find it. 🔍

🌸 Output section

  • -outfile report — where the report goes. Your results land in this file, periodt. 📝

💀 BUGS 💀

Found a bug? Not the vibe, but okay, let's handle it gracefully. 🫶

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

No cap, they genuinely want to know. Report the bug, don't suffer in silence. 😭

👑 SEE ALSO 👑

preg is fully documented via the tfm(1) system. So if you want the full lore, that's where the deep dive lives. iykyk 📚✨

🫶 AUTHOR 🫶

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page. Thank you for your service, script. 🎀

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.

Anyway bestie, that's the whole page. This one's from EMBOSS 6.4.0, dated 05/11/2012, and it goes by PREG(1e). Go regex those proteins, main character. You got this. 💅✨🧬

📦 where this page comes from