PEPWINDOW(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

✨ PEPWINDOW(1e) ✨

okay bestie, sit down, hydrate, and let me tell you about pepwindow 💖 this lil cutie lives in the EMBOSS Manual for Debian, and it's here to serve you a hydropathy plot for a protein sequence. yes, literally that.

🦋 NAME 🦋

pepwindow — Draw a hydropathy plot for a protein sequence 💅

🌸 SYNOPSIS 🌸

pepwindow -sequence sequence [-datafile datafile] [-length integer]
          [-normalize boolean] -graph xygraph

pepwindow -help

🎀 DESCRIPTION 🎀

so pepwindow is a command line program from EMBOSS — and yes, EMBOSS stands for “the European Molecular Biology Open Software Suite”, iconic name, no notes 👑

it hangs out in the "Protein:Properties" command group(s), which is giving very much protein-property-analysis main character energy ✨

💜 OPTIONS 💜

🍓 Input section 🍓

  • -sequence sequence — your protein sequence goes here, bestie 🧬
  • -datafile datafile — the data file it pulls from. Default value: Enakai.dat 📁

🌈 Additional section 🌈

  • -length integer — the length setting. Default value: 19 🔢
  • -normalize boolean — whether to normalize or not. Default value: N 🙈

👑 Output section 👑

  • -graph xygraph — where the graph comes out. you're getting an xygraph, periodt 💅📈

💀 BUGS 💀

found a bug? (rude of it, honestly.) you can report it to the Debian Bug Tracking system at http://bugs.debian.org/emboss, or slide it directly to the EMBOSS developers at http://sourceforge.net/tracker/?group_id=93650&atid=605031 🫶

⭐ SEE ALSO ⭐

pepwindow is fully documented via the tfm(1) system — so if you want the deep lore, that's where it lives 📚✨

🌸 AUTHOR 🌸

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page. (so yes, this was a robot-authored situation, we love a humble origin story 🤖💖)

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. 🌈

and that's the whole vibe check, bestie 💜 this was EMBOSS 6.4.0, dated 05/11/2012, tagging itself as PEPWINDOW(1e) — slay, go draw some hydropathy plots, you got this 🎀✨

📦 where this page comes from