LINDNA(1e)

πŸ’– LINDNA β€” the linear map glow-up πŸ’–

okay bestie, so lindna is a thing from the EMBOSS manual for Debian (that's the European Molecular Biology Open Software Suite, and yes it's giving very serious science energy πŸ’…). And it's literally here to draw linear maps of DNA constructs. Like, it takes your DNA and makes it a picture. Iconic behaviour, no cap. 🧬✨


✨ SYNOPSIS ✨

lindna -infile infile [-maxgroups integer] [-maxlabels integer]
       -ruler boolean -blocktype list [-intersymbol selection]
       [-intercolour integer] [-interticks boolean] [-gapsize integer]
       [-ticklines boolean] [-textheight float] [-textlength float]
       [-margin float] [-tickheight float] [-blockheight float]
       [-rangeheight float] [-gapgroup float] [-postext float]
       -graphout graph

lindna -help

πŸ¦‹ DESCRIPTION πŸ¦‹

so <hotpink>lindna</hotpink> is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"). It belongs to the "Display" command group(s). That's the whole vibe: you feed it stuff, it displays stuff. main character energy only. πŸ‘‘


πŸŽ€ OPTIONS πŸŽ€

🌸 Input section 🌸

  • -infile infile β€” the file you're feeding in. Default value: inputfile.

πŸ’œ Additional section πŸ’œ

  • -maxgroups integer β€” how many groups max, bestie. Default value: 20.
  • -maxlabels integer β€” cap on the labels. Default value: 10000.

πŸ’… Output section πŸ’…

  • -ruler boolean β€” ruler on or off. Default value: Y.
  • -blocktype list β€” what style the blocks are. Default value: Filled.
  • -intersymbol selection β€” the symbol used in between. Default value: Straight.
  • -intercolour integer β€” the colour for in-between bits. Default value: 1.
  • -interticks boolean β€” ticks in between, yes or no. Default value: N.
  • -gapsize integer β€” and listen: a zero value allows the application to choose a gap size. so like, let it cook πŸ“
  • -ticklines boolean β€” tick lines on or off. Default value: N.
  • -textheight float β€” height of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0.
  • -textlength float β€” length of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0.
  • -margin float β€” width of the left margin. This is the region left of the groups where the names of the groups are displayed. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0.
  • -tickheight float β€” height of ticks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0.
  • -blockheight float β€” height of blocks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.
  • -rangeheight float β€” height of range ends. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0.
  • -gapgroup float β€” space between groups. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0.
  • -postext float β€” space between text and ticks, blocks, and ranges. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0.
  • -graphout graph β€” where the graphic goes out. 🎨
ngl, every single one of those <1.0 / >1.0 sliders is a little vibe check: go under 1.0 and things shrink, go over 1.0 and things grow. that's it, that's the whole trick. πŸ’€

😭 BUGS 😭

found a bug? not cute, but okay. Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or you can go straight to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031). they'll handle it, bestie. 🫢


πŸ‘€ SEE ALSO πŸ‘€

lindna is fully documented via the tfm(1) system. so if you want the deep lore, that's where it lives. iykyk. πŸ“–


πŸ‘‘ AUTHOR πŸ‘‘

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page. (shoutout to the autogenerator, doing the lord's work ✨)

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. so like, respect the terms and we're all good. 🌈


okay that's the whole page, periodt. this was <rainbow>EMBOSS 6.4.0</rainbow>, dated <purple>05/11/2012</purple>, and it's the LINDNA(1e) manual β€” go draw something gorgeous with it, bestie. πŸ’…πŸ¦‹βœ¨