HMOMENT(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

💖 hmoment — it's giving hydrophobic moment 💖

okay bestie, welcome to hmoment(1e), aka the EMBOSS Manual for Debian page you're literally reading right now. no cap, this little icon is about to compute and plot the hydrophobic moment for your protein sequence(s). yes, that's the whole thing. she's focused, she's iconic, she's part of the "Protein:Properties" command group(s). slay. ✨

🦋 SYNOPSIS 🦋

like, this is the shape of the whole vibe:

hmoment -seqall seqall [-window integer] [-aangle integer]
        [-bangle integer] -baseline float -plot toggle -double boolean
        -graph xygraph -outfile outfile

hmoment -help

so you got your required bits (-seqall, -baseline, -plot, -double, -graph, -outfile) and your optional lil friends (-window, -aangle, -bangle). and if you're lost, -help is right there for you. 🫶

🌸 DESCRIPTION 🌸

so hmoment is a command line program from EMBOSS — that's “the European Molecular Biology Open Software Suite”, iykyk — and it calculates and plots the hydrophobic moment for protein sequence(s). she lives in the "Protein:Properties" command group(s), which is exactly where you'd expect to find her. 💅

✨ OPTIONS ✨

💜 Input section

  • -seqall seqall — this is where you hand over your sequence input. the main character of your command, fr fr.

🎀 Additional section

  • -window integer — sets the window. default value: 10.
  • -aangle integer — the alpha angle situation. default value: 100.
  • -bangle integer — the beta angle situation. default value: 160.

🦋 Advanced section

  • -baseline float — the baseline. default value: 0.35. this one is required in the synopsis, so don't ghost it. 🙈

🌈 Output section

  • -plot toggle — plot on or off? default value: N.
  • -double boolean — double or not? default value: N.
  • -graph xygraph — where the graph output goes.
  • -outfile outfile — where the output file goes. your little souvenir of the whole experience. 🎁

💀 BUGS 💀

found a bug? not the vibe, but okay, report it. bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031). go tell them, bestie, they want to know. 🐛

👑 SEE ALSO 👑

hmoment is fully documented via the tfm(1) system. so if you want the deep lore, that's where it's at.

💖 AUTHOR 💖

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page.

shoutout to them, honestly. 🫶

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. so like, keep the same energy, keep the same terms. periodt. 💅

and that's the whole page, bestie!! this was EMBOSS 6.4.0, dated 05/11/2012, and it's filed under HMOMENT(1e) — go calculate that hydrophobic moment, you absolute icon 🌟

📦 where this page comes from