FREAK(1e)

πŸ’– FREAK(1e) πŸ’–

okay bestie, welcome to the manual page for freak, from the EMBOSS Manual for Debian (section 1e, iykyk). sit down, grab a boba, we're doing this πŸ’…


✨ NAME ✨

freak β€” generate residue/base frequency table or plot 🌸


✨ SYNOPSIS ✨

freak -seqall seqall -letters string [-step integer] [-window integer]
      -plot toggle -graph xygraph -outfile outfile

freak -help

periodt. that's the whole vibe. 🫢


✨ DESCRIPTION ✨

so freak is a command line program from EMBOSS, aka "the European Molecular Biology Open Software Suite" πŸ‘‘. it lives in the "Nucleic:Composition,Protein:Composition" command group(s), which is basically its little friend group.


✨ OPTIONS ✨

🌸 Input section 🌸

  • -seqall seqall β€” the sequence input, drop it here bestie 🧚

πŸŽ€ Required section πŸŽ€

  • -letters string β€” the letters we're counting. default value: gc ⭐
this one is required, no skipping it, no cap.

πŸ¦‹ Additional section πŸ¦‹

  • -step integer β€” the step size. default value: 1
  • -window integer β€” the window size. default value: 30

πŸ’œ Output section πŸ’œ

  • -plot toggle β€” whether you want a plot. default value: N
  • -graph xygraph β€” the graph output goes here πŸ“ˆ
  • -outfile outfile β€” where the output file lands πŸ’Ύ

πŸ’€ BUGS πŸ’€

if something's cursed, bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or you can go straight to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031). they want to hear from you, fr fr πŸ™ˆ


πŸ‘€ SEE ALSO πŸ‘€

freak is fully documented via the tfm(1) system. go read it, it's giving main character energy ✨


🫢 AUTHOR 🫢

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page. slay, honestly πŸ’…

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.


and that's the whole page, bestie πŸŽ€ this lil' number came from EMBOSS 6.4.0, dated 05/11/2012. no cap, that's the version and the date right there. go forth and count them letters πŸ’–βœ¨