DOTPATH(1e)
π DOTPATH(1e) π
okay bestie, so this lil cutie lives in the EMBOSS Manual for Debian and it's literally called dotpath π
like, that's the whole vibe.
β¨ NAME β¨
dotpath β draw a non-overlapping wordmatch dotplot of two sequences π¦
πΈ SYNOPSIS πΈ
dotpath -asequence sequence -bsequence sequence -wordsize integer
[-overlaps boolean] [-boxit boolean] -graph graph
dotpath -help
like. that's it. that's the whole summoning circle β¨
π«Ά DESCRIPTION π«Ά
so dotpath is a command line program from EMBOSS (βthe European Molecular Biology Open Software Suiteβ). no cap. it's part of the "Alignment:Dot plots" command group(s), so if you're out here doing dot plot things, this is your girl πββοΈ
π OPTIONS π
π Input section π
-asequencesequence β your first sequence goes here, bestie π§¬-bsequencesequence β and this is where the second one goes π
π Required section π
-wordsizeinteger β the size of the words it matches on. Default value:4β
π Output section π
-overlapsboolean β displays the overlapping matches (in red) as well as the minimal set of non-overlapping matches. Default value:Nπ₯-boxitboolean β Default value:Yπ-graphgraph β where the graph goes, obviously πΌοΈ
π BUGS π
found a bug? not the vibe. π report it to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or slide directly into the EMBOSS developers' DMs (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
π SEE ALSO π
dotpath is fully documented via the tfm(1) system. iykyk πβ¨
π«Ά AUTHOR π«Ά
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
- wrote the script used to autogenerate this manual page ποΈ
π COPYRIGHT π
this manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. it can be redistributed under the same terms as EMBOSS itself. periodt π
EMBOSS 6.4.0 Β· 05/11/2012 β ok that's the whole page bestie, mwah, go plot some dots π¦πβ¨
π¦ where this page comes from
- debian bookworm: emboss 6.6.0+dfsg-12 Β· emboss
- debian trixie: emboss 6.6.0+dfsg-15 Β· emboss
- ubuntu jammy: emboss 6.6.0+dfsg-11ubuntu1 Β· emboss
- ubuntu noble: emboss 6.6.0+dfsg-12ubuntu2 Β· emboss
- ubuntu questing: emboss 6.6.0+dfsg-15ubuntu2
- ubuntu resolute: emboss 6.6.0+dfsg-18 Β· emboss
- ubuntu stonking: emboss 6.6.0+dfsg-19 Β· emboss
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms