DOTPATH(1e)

πŸ’– DOTPATH(1e) πŸ’–

okay bestie, so this lil cutie lives in the EMBOSS Manual for Debian and it's literally called dotpath πŸ’… like, that's the whole vibe.


✨ NAME ✨

dotpath β€” draw a non-overlapping wordmatch dotplot of two sequences πŸ¦‹


🌸 SYNOPSIS 🌸

dotpath -asequence sequence -bsequence sequence -wordsize integer
        [-overlaps boolean] [-boxit boolean] -graph graph

dotpath -help

like. that's it. that's the whole summoning circle ✨


🫢 DESCRIPTION 🫢

so dotpath is a command line program from EMBOSS (β€œthe European Molecular Biology Open Software Suite”). no cap. it's part of the "Alignment:Dot plots" command group(s), so if you're out here doing dot plot things, this is your girl πŸ’β€β™€οΈ


πŸ‘‘ OPTIONS πŸ‘‘

πŸŽ€ Input section πŸŽ€

  • -asequence sequence β€” your first sequence goes here, bestie 🧬
  • -bsequence sequence β€” and this is where the second one goes πŸ’œ

🌈 Required section 🌈

  • -wordsize integer β€” the size of the words it matches on. Default value: 4 ⭐

πŸ’… Output section πŸ’…

  • -overlaps boolean β€” displays the overlapping matches (in red) as well as the minimal set of non-overlapping matches. Default value: N πŸ”₯
  • -boxit boolean β€” Default value: Y 🎁
  • -graph graph β€” where the graph goes, obviously πŸ–ΌοΈ

πŸ’€ BUGS πŸ’€

found a bug? not the vibe. 😭 report it to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or slide directly into the EMBOSS developers' DMs (http://sourceforge.net/tracker/?group_id=93650&atid=605031).


πŸ” SEE ALSO πŸ”

dotpath is fully documented via the tfm(1) system. iykyk πŸ“–βœ¨


🫢 AUTHOR 🫢

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • wrote the script used to autogenerate this manual page πŸ–ŠοΈ

this manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. it can be redistributed under the same terms as EMBOSS itself. periodt πŸ’…


EMBOSS 6.4.0 Β· 05/11/2012 β€” ok that's the whole page bestie, mwah, go plot some dots πŸ¦‹πŸ’–βœ¨