DBIFASTA(1e)

💅 DBIFASTA — like, the whole vibe

okay bestie, welcome to dbifasta from the EMBOSS Manual for Debian (manual page DBIFASTA(1e), she's an EMBOSS girlie, section 1e). Sit down, hydrate, and let's index a fasta database together. 🦋

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✨ NAME ✨

dbifasta — index a fasta file database 💖

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🌸 SYNOPSIS 🌸

dbifasta -dbname string -idformat list -directory directory
         -filenames string -release string -date string -fields list
         -exclude string -maxindex integer -sortoptions string
         -systemsort boolean -cleanup boolean -outfile outfile
         -indexoutdir outdir

dbifasta -help

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🎀 DESCRIPTION 🎀

so. dbifasta is a command line program from EMBOSS — that's "the European Molecular Biology Open Software Suite", no cap, that's the actual name. 👑

She belongs to the "Utils:Database indexing" command group(s). That's her whole thing. That's her main character era. ✨

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🫶 OPTIONS 🫶

💜 Input section

• -dbname string — the database name, bestie.
• -idformat list — default value: idacc
• -directory directory — default value: .
• -filenames string — default value: *.dat

🌈 Required section

not optional, girly. these two are REQUIRED, we don't skip them.

• -release string — default value: 0.0
• -date string — default value: 00/00/00

🔥 Advanced section

• -fields list — default value: acc
• -exclude string
• -maxindex integer
• -sortoptions string — sort options, typically -T . to use current directory for work files and -k 1,1 to force GNU sort to use the first field. Default value: -T . -k 1,1
• -systemsort boolean — default value: Y
• -cleanup boolean — default value: Y

🌸 Output section

• -outfile outfile
• -indexoutdir outdir — default value: .

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💀 BUGS 💀

found a bug? 😭 first of all, relatable. Report bugs to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or slide directly into the EMBOSS developers' DMs (http://sourceforge.net/tracker/?group_id=93650&atid=605031). 🫶

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👀 SEE ALSO 👀

dbifasta is fully documented via the tfm(1) system. iykyk 💅

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👑 AUTHOR 👑

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

• Wrote the script used to autogenerate this manual page. iconic behavior honestly. ✨

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💖 COPYRIGHT 💖

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.

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okay that's the whole page bestie, you ate that. go index something. 🌈

EMBOSS 6.4.0 · dated 05/11/2012 · page DBIFASTA(1e) — mwah, periodt. 💅🎀