CIRDNA(1e)

💫 CIRDNA(1e) — ok bestie, it's giving circular DNA maps 💫

the manual name is cirdna(1e) btw, and yes this is the EMBOSS Manual for Debian version, we're fancy like that ✨

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🌸 NAME 🌸

cirdna — draws circular maps of DNA constructs. That's it, that's the girl. A whole little artist for your plasmids 💖

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🎀 SYNOPSIS 🎀

cirdna -infile infile [-maxgroups integer] [-maxlabels integer]
       -ruler boolean -blocktype list [-originangle float]
       -posticks selection -posblocks selection [-intersymbol boolean]
       [-intercolour integer] [-interticks boolean] [-gapsize integer]
       [-ticklines boolean] [-textheight float] [-textlength float]
       [-tickheight float] [-blockheight float] [-rangeheight float]
       [-gapgroup float] [-postext float] -graphout graph

cirdna -help

see how some of those are in square brackets and some aren't? that's the required vs optional vibe check, don't skip the mandatory ones or she WILL complain 😭

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🦋 DESCRIPTION 🦋

So cirdna is a command line program from EMBOSS (aka "the European Molecular Biology Open Software Suite", they're the blueprint of bioinformatics besties honestly). It belongs to the "Display" command group(s), which like, makes sense, because she's literally here to display things 💅

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✨ OPTIONS ✨

💜 Input section

• -infile infile — the input file, bestie. Default value: inputfile

💜 Additional section

• -maxgroups integer — max groups. Default value: 20
• -maxlabels integer — max labels. Default value: 10000

💜 Output section

• -ruler boolean — Default value: Y
• -blocktype list — Default value: Filled
• -originangle float — Default value: 90
• -posticks selection — Default value: Out
• -posblocks selection — Default value: In
• -intersymbol boolean — Default value: Y
• -intercolour integer — Default value: 1
• -interticks boolean — Default value: N
• -gapsize integer — Default value: 500
• -ticklines boolean — Default value: N
• -textheight float — Height of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0
• -textlength float — Length of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0
• -tickheight float — Height of ticks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0
• -blockheight float — Height of blocks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0
• -rangeheight float — Height of range ends. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0
• -gapgroup float — Space between groups. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0
• -postext float — Space between text and ticks, blocks, and ranges. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively. Default value: 1.0
• -graphout graph — the output graph, the whole point of the exercise, no default, she needs it 🫶

lowkey important: those height/length/space ones all work the same way — go below 1.0 to shrink, go above 1.0 to grow, and leave it at 1.0 for the untouched default look. periodt.

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💀 BUGS 💀

Found a bug? Not the vibe, but ok. Report it to the Debian Bug Tracking system at http://bugs.debian.org/emboss, or you can go straight to the EMBOSS developers at http://sourceforge.net/tracker/?group_id=93650&atid=605031. They'll fix her up 🙈

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🌈 SEE ALSO 🌈

cirdna is fully documented via the tfm(1) system. iykyk — if you know, you know 👑

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👑 AUTHOR 👑

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

• Wrote the script used to autogenerate this manual page. iconic behaviour honestly 💅

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💖 COPYRIGHT 💖

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. so like, share the love, same rules as EMBOSS, no gatekeeping 🎀

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ok that's the whole page bestie!! this was EMBOSS 6.4.0, dated 05/11/2012, and you just read CIRDNA(1e) — go draw some gorgeous little circles, mwah 💋✨🦋