BIOSED(1e)

💖 BIOSED(1e) 💖

okay bestie, welcome to the manual page for biosed — straight out of the EMBOSS Manual for Debian. Buckle up, this one's a little diva but she's iconic.

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✨ NAME ✨

biosed — Replace or delete sequence sections 🦋

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🌸 SYNOPSIS 🌸

biosed -sequence seqall -targetregion string -delete toggle
       -replace string [-position integer] -outseq seqout

biosed -help

that's it, that's the whole vibe check. Two ways in: the big full run, or just asking for -help like a normal person 🙈

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🎀 DESCRIPTION 🎀

So biosed is a command line program from EMBOSS — and if you don't know, EMBOSS is literally "the European Molecular Biology Open Software Suite" 💅 no cap.

She hangs out in the "Edit" command group(s), which is giving main character energy fr fr. Editing sequences, replacing bits, deleting bits — she's booked and busy. ✨

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👑 OPTIONS 👑

🧚 Input section

• -sequence seqall — the sequence input goes here. Hand her the goods, bestie. 💖

🍓 Required section

these ones you gotta fill in, no skipping, periodt.

• -targetregion string — the target region, as a string.
  • Default value: N
• -delete toggle — the delete toggle, do you wanna delete or nah.
  • Default value: N
• -replace string — the replacement string, what's going in instead.
  • Default value: A

🦋 Additional section

• -position integer — a position, as an integer. extra credit, optional.

🌈 Output section

• -outseq seqout — where the finished sequence goes. manifest it, girl. ✨

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💀 BUGS 💀

Found a bug? not the vibe, but okay, let's report it properly:

• the Debian Bug Tracking system at http://bugs.debian.org/emboss
• or go straight to the EMBOSS developers at http://sourceforge.net/tracker/?group_id=93650&atid=605031

they literally want to know, so tell them. 🫶

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🎀 SEE ALSO 🎀

biosed is fully documented via the tfm(1) system. iykyk. 🌸

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💜 AUTHOR 💜

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

• Wrote the script used to autogenerate this manual page. (yes, a script wrote this, and honestly? she ate.) 🤖✨

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⭐ COPYRIGHT ⭐

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. 💖

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lowkey important: this page came from EMBOSS 6.4.0, dated 05/11/2012, and she's the BIOSED(1e) manual page. bye bestie, go edit some sequences 💅 🦋