ALIGNCOPY(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

💖 ALIGNCOPY(1e) 💖

the Unix manual page, but make it cute — EMBOSS Manual for Debian

✨ NAME ✨

aligncopy — reads and writes alignments 👑

🦋 SYNOPSIS 🦋

aligncopy -sequences seqset [-name string] [-comment string]
          [-append boolean] -outfile align

aligncopy -help

🌸 DESCRIPTION 🌸

okay so bestie, aligncopy is a command line program from EMBOSS — and in case you were wondering, that stands for “the European Molecular Biology Open Software Suite”. iconic name, we love a backronym 💅

It's part of the "Edit" command group(s). That's the whole vibe: it's an edit-y little guy. periodt.

🎀 OPTIONS 🎀

💜 Input section 💜

  • -sequences seqset — the file containing a sequence alignment. That's your input, your main character file, the one you're copying from. 🫶

✨ Required section ✨

  • no options live here in this page — it's giving empty. still required though, iykyk. 🙈

🌈 Additional section 🌈

  • -name string — a name, as a string. ✨
  • -comment string — a comment, as a string. ✨
  • -append boolean — this lets you append the name and comments you've given onto the end of the existing alignment header. default value: N 😌

⭐ Advanced section ⭐

  • also empty bestie, nothing to see here, it's giving mysterious 💀

🍓 Output section 🍓

  • -outfile align — where the alignment goes when it's done. your output, your moment, your slay. 💖

😭 BUGS 😭

Found a bug? not the vibe. Report it to the Debian Bug Tracking system at http://bugs.debian.org/emboss, or straight to the EMBOSS developers at http://sourceforge.net/tracker/?group_id=93650&atid=605031. they wanna hear it, fr fr 🫶

👑 SEE ALSO 👑

aligncopy is fully documented via the tfm(1) system. so if you want the deep lore, that's where it lives. 🔥

💅 AUTHOR 💅

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page. yes, a script wrote this. we're all just out here automating, and honestly? ate. ✨

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. 💜

and that's the whole page bestie — EMBOSS version 6.4.0, dated 05/11/2012. go forth and copy those alignments 🦋🎀✨

📦 where this page comes from