VCF-SHUFFLE-COLS(1)

💖 VCF-SHUFFLE-COLS 💖

okay bestie, so like… this is vcf-shuffle-cols, a User Command, and she is here to reorder your columns and she does it flawlessly, no notes 💅

✨ NAME ✨

vcf-shuffle-cols — reorder columns 🎀

🌸 SYNOPSIS 🌸

vcf-shuffle-cols [OPTIONS] -t template.vcf.gz file.vcf.gz > out.vcf

like… that's the whole vibe, that's the moment, that's the serve 🌈

🦋 DESCRIPTION 🦋

About: Reorder columns to match the order in the template VCF. periodt 💖

that's literally it. you hand her a template, she looks at the order of the columns in it, and she goes "oh so THIS is the order we're doing now" and rearranges your other file to match. iconic behaviour, honestly. main character energy fr fr ✨

👑 OPTIONS 👑

• -t, --template <file> — the file with the correct order of the columns. this is THE moment, the blueprint, the source of truth 🫶 she's gonna copy the column order from here, so make sure it's the one you actually want.
• -h, -?, --help — this help message 💖 so you never have to guess, queen.

💜 SEE ALSO 💜

(ngl there's nothing else listed here, she's a standalone icon 🔥)

💀 heads up bestie: the synopsis shows the output going to > out.vcf, so that redirect is on you — she just writes to stdout like the little legend she is.

mwah 💋 that's the whole page. stay slay, stay sorted, keep those columns in the right order. 🌸

— this page is brought to you by vcf-shuffle-cols, version February 2013, from the VCF-SHUFFLE-COLS(1) era, iykyk 💜🎀