TIGR-GLIMMER(1)

✨ NAME ✨

tigr-glimmer β€” bestie, this is the little wrapper that runs all the various programs of the TIGR Glimmer suite πŸ’– it's from the General Commands Manual, and honestly it's giving "one key to the whole kingdom" πŸ”‘


πŸŽ€ SYNOPSIS πŸŽ€

tigr-glimmer program [arguments]

That's it. You hand it a program, you hand it some arguments, it goes and does the thing. Periodt. πŸ’…


πŸ¦‹ DESCRIPTION πŸ¦‹

Okay so listen, this manual page is the quick lil rundown of the tigr-glimmer wrapper for the TIGR Glimmer programs. And here's the tea β˜•: this page was written for the Debian GNU/Linux distribution specifically, because upstream does not provide this wrapper at all β€” it was invented for Debian to dodge conflicts with other packages that might cause a name space pollution situation. Not the vibe, so Debian said "not on my watch" 🫢

tigr-glimmer is literally just a wrapper that invokes the various programs in the TIGR Glimmer software package. That's its whole job. Iconic, unbothered, single-purpose. πŸ‘‘

Want the detailed documentation? It's chillin' in /usr/share/doc/tigr-glimmer πŸ“‚ β€” and heads up, the docs sitting in there are a part of the former version, Glimmer 2. The version Glimmer 3 has some features that were described in the notes.pdf document inside that documentation directory. So if you're on Glimmer 3 and the docs feel a lil vintage, that's why, no cap. πŸ“

Now, the programs included are:

  • anomaly
  • build-fixed
  • build-icm
  • entropy-profile
  • entropy-score
  • extract
  • glimmer3
  • long-orfs
  • multi-extract
  • score-fixed
  • start-codon-distrib
  • test
  • uncovered
  • window-acgt

A whole squad fr fr 🌈


πŸ’… OPTIONS πŸ’…

There are no options.

I know, I know 😭 bestie said "no options" and meant it. The flags live in the individual programs, not here. Slay in the most minimal way possible ✨

🌸 EXAMPLES 🌸

Lowkey just pick a program and go, like:

tigr-glimmer build-icm
tigr-glimmer long-orfs

See? No notes. Gorgeous. πŸŽ€


πŸ’œ SEE ALSO πŸ’œ

For the previously packaged version Glimmer2, some text files from the documentation were turned into man pages for the Debian GNU/Linux distribution by Steffen Moeller <moeller@debian.org> πŸ“–βœ¨


πŸ‘‘ AUTHORS πŸ‘‘

This manual page was written by Andreas Tille <tille@debian.org>, for the Debian GNU/Linux system (but may be used by others). Main character energy tbh πŸ’–


And that's the whole page, bestie β€” signed off from <b>April 16, 2008</b>, version vibes and all, source being the Debian GNU/Linux General Commands Manual entry for TIGR-GLIMMER(1). Now go run something πŸ”₯ 🌟