SNP2MIPE(1)

💖 SNP2MIPE 💖

okay bestie, so this is snp2mipe.pl, a lil Perl script that inserts SNP data into a MIPE file ✨ It's from the User Contributed Perl Documentation corner of the manual, so you know it's a community-crafted situation 🫶

🚨 CAUTION: DOES NOT WORK WITH MIPEv1.0 YET!! 🚨 like literally do not try it, she is not ready

she's built on MIPE version v0.9 — that's her whole vibe, that's the era she lives in 💅

the way she takes her inputs? two of them, and they're giving very different energy:

• mipe_file — the file you're writing into 🎀
• STDIN — a tab-delimited list of data, and the order is NOT negotiable, she is very particular about it:
  1. PCR ID
  2. SNP ID
  3. SNP pos
  4. SNP amb
  5. SNP rank
  6. SNP remark

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✨ SYNOPSIS ✨

snp2mipe.pl my_file.mipe < my_data.txt

that's it. that's the whole summoning ritual 🔥 pipe your data in, name your mipe file, go off 👑

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🌈 ADDITIONAL INFO 🌈

more lore lives here, go look: http://mipe.sourceforge.net 🦋

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👑 AUTHOR 👑

this icon was written by Jan Aerts (jan.aerts@bbsrc.ac.uk) — thank you for your service, legend 🫡💜

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🌸 okay that's the whole page, hope it ate 🌸 this was perl v5.32.1, dated 2021-02-21, filed under SNP2MIPE(1) — mwah, bye bestie 💖🎀✨