SNAP-ALIGNER(1)

📦
version 2.0.5 · 4 versions
, in ubuntu resolute, ubuntu stonking

💖 SNAP-ALIGNER 💖

okay bestie, gather round, because this is the manual page for snap-aligner — scalable nucleotide alignment program — and honestly? it's giving main character energy. it's a User Command, it's iconic, and yes it's literally called SNAP. periodt. 🧬✨

🌸 NAME 🌸

snap-aligner — the scalable nucleotide alignment program. that's it, that's the name, no cap. 💅

✨ SYNOPSIS ✨

snap-aligner <command> [<options>]

so like, you give it a command and then some options, and it does the thing. simple as that, fr fr. 🫶

🦋 DESCRIPTION 🦋

Welcome to SNAP version 2.0.5, bestie!! 🎀 you made it. this is the whole vibe right here.

👑 Commands:

  • index — build a genome index. yes queen, lay the foundation first. 🏗️✨
  • single — align single-end reads. one read at a time, doing its little solo moment. 🌟
  • paired — align paired-end reads. they came as a set, they get aligned as a set. besties stick together. 🫂💖
  • daemon — run in daemon mode--accept commands remotely. it just vibes in the background and takes orders from afar. spooky? no. iconic? yes. 💀👑
real talk: type a command without arguments and it'll show you its help. it's not shy, it'll tell you what it needs. 🙈

and that's the whole page, babe. snap-aligner 2.0.5, September 2025, SNAP-ALIGNER(1) — written down in the history books, dated and everything. mwah. 💋🌸🦋

📦 where this page comes from