REMOVE_SHORT_SEQS(1)

✨ REMOVE_SHORT_SEQS(1) ✨

okay so bestie, welcome to remove_short_seqs 💅 this lil icon lives in the User Commands corner of your manual and it's all about visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences 🦠🌿 no cap, that's literally the whole vibe.

🌸 NAME 🌸

remove_short_seqs — visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences 🧬✨

💖 DESCRIPTION 💖

here's the raw tea, verbatim, because we do not gatekeep the usage string:

usage: remove_short_seqs [[-i input] [-l length] | [-h]] -i DIRECTORY
the input directory of GenBank files with .gbk extensions -l INTEGER
remove GenBank files that describe sequences shorter than this length

🎀 USAGE: 🎀

remove_short_seqs -i DIR -l INTEGER

🦋 DESCRIPTION: 🦋

Removes GenBank files that are shorter than the specified length from the provided directory. that's it, that's the job, and it eats every time 🍓

👑 REQUIRED ARGUMENTS: 👑

like the name says, you cannot skip these. main character requirements fr fr.

• -i, --input DIR — the input directory full of GenBank files that have .gbk extensions 📂✨
• -l, --length INTEGER — removes the GenBank files that describe sequences shorter than this length 📏 bye bye shorties

🌈 OPTIONAL ARGUMENTS: 🌈

• -h, --help — shows this message 🫶 (she's helpful, she's kind, she's lowkey iconic)

⭐ EXAMPLE: ⭐

remove_short_seqs -i my_project/comparison_genomes -l 100000

look at her go 😭💖

💜 AUTHOR 💜

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program 🫡🌸

and that's the whole page bestie!! this one shipped as remove_short_seqs version 20170919, dated August 2018 🎀 slay, mwah, go filter some sequences 💅✨🦋