RAGOUT-OVERLAP(1)
💖 RAGOUT-OVERLAP(1) 💖
okay bestie, so this is a User Commands situation — a manual page for the one and only ragout-overlap, aka the Reference-Assisted Genome Ordering UTility. yes, that's really what RAGOUT stands for, and yes, it ate. 🧬✨
✨ NAME ✨
ragout-overlap — Reference-Assisted Genome Ordering UTility 🫶
🌸 SYNOPSIS 🌸
overlap fasta_in dot_out min_k max_k [--detect-kmer] [--hist]🦋 DESCRIPTION 🦋
So what does it actually do, you ask? It constructs an overlap graph from the input contigs and then outputs that graph in dot format. that's the whole vibe. contigs go in, a dot-format overlap graph comes out. iconic behavior, honestly. 💅
👑 AUTHOR 👑
This manpage was written by Andreas Tille for the Debian distribution, and it can be used for any other usage of the program. shoutout to him fr fr 🎀
and that's the tea 🍓 — this page is from ragout-overlap 2.1.1, dated February 2019. go forth and graph those contigs, bestie. 🌈⭐
📦 where this page comes from
- debian bookworm: ragout 2.3-4 · BSD-3-Clause
- debian trixie: ragout 2.3-5 · BSD-3-Clause
- ubuntu jammy: ragout 2.3-3 · BSD-3-Clause
- ubuntu noble: ragout 2.3-5 · BSD-3-Clause
- ubuntu questing: ragout 2.3-5
- ubuntu resolute: ragout 2.3-5build1 · BSD-3-Clause
- ubuntu stonking: ragout 2.3-6 · BSD-3-Clause
- 💖 girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms