RABEMA_PREPARE_SAM(1)
π RABEMA_PREPARE_SAM π
okay so bestie, welcome to rabema_prepare_sam, section 1 of the manual pages β it's giving "tiny tool, huge glow-up for your SAM files" β¨
πΈ NAME πΈ
rabema_prepare_sam β get your SAM file all cute and ready for RABEMA π
π¦ SYNOPSIS π¦
rabema_prepare_sam -i IN.sam -o OUT.sam
like. that's it. that's the whole vibe. two flags and you're done, no cap π«Ά
π DESCRIPTION π
It prepares a SAM file so you can actually use it with RABEMA. That's the entire job, and honestly? She ate. π₯
β¨ OPTIONS β¨
-h,--helpβ shows you the help message, because sometimes we all need a little guidance π₯Ί--versionβ prints the version info, so you know exactly which queen you're working with π-i,--in-fileINPUT_FILEβ the path to your input file. valid filetype is:.samπ₯-o,--out-fileOUTPUT_FILEβ the path to your output file. valid filetype is:.samπ€--dont-check-sortingβ skips the sortedness check. do not check sortedness, bestie. she said "I'm not looking" π
lowkey a lil reminder: those input and output files gotta be .sam, that's the only valid filetype listed here. don't try to sneak anything else in π
and that's the whole page, you're welcome π
sign-off time: this was rabema_prepare_sam, version 1.2.14 [tarball], hanging out in section 1 of the manual β¨ mwah, go prep those SAMs, you've got this ππ
π¦ where this page comes from
- ubuntu stonking: seqan-apps 2.5.2-1 Β· BSD-3-Clause
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms