PXTCOMB(1)

📦
version 1.3.2 · 3 versions
, in debian trixie, ubuntu questing, ubuntu resolute, ubuntu stonking

✨ PXTCOMB(1) ✨

okay so bestie, we're in the User Commands section of the manual, and today's main character is pxtcomb 💅

🌸 NAME 🌸

pxtcomb — combine set of trees from files 🦋

🎀 SYNOPSIS 🎀

pxtcomb [OPTIONS]... FILE

💖 DESCRIPTION 💖

no cap, here's the whole vibe: you combine a set of trees from one file into a tree from another. that's it, that's the job 🫶

so like, you pass in 2 trees with t and a and let it cook ✨

🌈 OPTIONS 🌈

  • -t, --treef=FILE — the reference treefile, bestie. if you don't hand one over it's gonna read from STDIN instead 🙈
  • -a, --addtree=FILE — the alternate treefile 👑
  • -o, --outf=FILE — where the output goes. and jsyk, if you skip this it writes to STOUT 😭
  • -h, --help — shows you this help and then dips. display this help and exit 🎀
  • -V, --version — flexes the version number and exits ⭐
  • -C, --citation — serves up the phyx citation and exits 📚

🔥 CITATION 🔥

if you're gonna use this in your work, you GOTTA cite it, it's the rules bestie:

Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063.

🦋 AUTHOR 🦋

Written by Stephen A. Smith (blackrim) — iconic behavior honestly 👑

🍓 REPORTING BUGS 🍓

found a bug? do NOT suffer in silence, tell the devs 🫶

Copyright © 2017-2024 FePhyFoFum License GPLv3

and that's a wrap, bestie 💖 this was pxtcomb version 1.3.1, living its best life back in June 2024 🌸 mwah, slay, periodt 💅✨

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