PSW(1)

💖 PSW — bestie edition 💖

okay so real talk, this is psw from section 1 of the General Commands Manual, and she's about to do protein alignments for you. let's go 🧚

✨ NAME ✨

psw — Protein Smith-Waterman and other comparisons 🧬

🌸 SYNOPSIS 🌸

psw [options ... ]  { seq1 seq2 }

🎀 DESCRIPTION 🎀

so psw is a short and sweet lil program that calculates smith waterman alginments quickly. that's the whole vibe. no cap. 💅

the tea is: it was mainly written as a C driver to test the underlying code — and that underlying code is actually way more useful in things like the Perl port. so like, psw is the test-drive car, not the whole dealership, iykyk 🚗✨

👑 OPTIONS 👑

• -help — shows you a lil summary of the options. the "what does this even do" button 🫶
• -version — shows the version of the program. identity check fr fr 💜

🌈 SEE ALSO 🌈

you are SO not gonna be normal about this list bestie, look at all her sisters:

• dba (1)
• dnal (1)
• estwise (1)
• estwisedb (1)
• genewise (1)
• genewisedb (1)
• genomewise (1)
• promoterwise (1)
• pswdb (1)
• scanwise (1)
• scanwise_server (1)

💜 AUTHOR 💜

this manual page was written by Philipp Benner mail@philipp-benner.de for the Debian system (but may be used by others). and here's the legal bit, keeping it 100:

Permission is granted to copy, distribute and/or modify this document under the terms of the GNU General Public License, Version 2 any later version published by the Free Software Foundation.

on Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-licenses/GPL. 📜

and that's the whole page bestie — PSW(1), General Commands Manual, section 1, and that's a wrap. periodt. 💅✨🦋